Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AP005432.1-201ENST00000580891 3485 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VTA1Q9NP79 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VTA1Q9NP79 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VTA1Q9NP79 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
VTA1Q9NP79 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VTA1Q9NP79 AC100757.1-201ENST00000616872 1835 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VTA1Q9NP79 HMGB1P5-201ENST00000255320 642 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 Y_RNA.169-201ENST00000363745 96 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 RNU6-707P-201ENST00000364647 95 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 AC093719.1-202ENST00000392735 373 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 GJA6P-201ENST00000415117 1042 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 RPL7P53-201ENST00000421245 739 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 AL390023.1-201ENST00000428836 262 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
VTA1Q9NP79 RPS29P10-201ENST00000439197 166 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 KNOP1P3-201ENST00000446933 426 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 AL133217.1-201ENST00000450980 425 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 AC108161.1-201ENST00000461060 402 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 AP000797.2-201ENST00000475768 606 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 AC126121.1-201ENST00000482313 553 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 AC084024.2-201ENST00000503480 791 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 RPF2P2-201ENST00000504693 896 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VTA1Q9NP79 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 AC098799.3-201ENST00000506095 438 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 AC108471.1-201ENST00000513977 287 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 AP000619.3-201ENST00000535634 1127 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 AC016839.1-201ENST00000578162 867 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 AC011487.3-201ENST00000593607 453 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 AL392112.1-201ENST00000605115 829 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 AP005137.2-201ENST00000609238 400 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 AC055764.2-201ENST00000610089 670 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 AC006840.1-201ENST00000623069 542 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VTA1Q9NP79 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 AC025263.3-201ENST00000622965 1396 ntBASIC5.91□□□□□ -1.46
VTA1Q9NP79 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
VTA1Q9NP79 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VTA1Q9NP79 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VTA1Q9NP79 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
VTA1Q9NP79 ECM1P2-201ENST00000503354 1577 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.9□□□□□ -1.46
VTA1Q9NP79 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VTA1Q9NP79 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
VTA1Q9NP79 RNA5SP90-201ENST00000364801 99 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 U3.28-201ENST00000391249 210 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 OR8V1P-201ENST00000395193 873 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.9□□□□□ -1.46
VTA1Q9NP79 AC009518.2-201ENST00000418056 731 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 AC006960.1-201ENST00000419980 153 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 AL354766.1-201ENST00000423396 542 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 AL365203.2-201ENST00000423444 196 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.9□□□□□ -1.46
VTA1Q9NP79 DPRXP1-201ENST00000426312 460 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 VTI1BP4-201ENST00000427516 527 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 MTCO1P54-201ENST00000430139 712 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.9□□□□□ -1.46
VTA1Q9NP79 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.9□□□□□ -1.46
VTA1Q9NP79 MTND1P32-201ENST00000433043 938 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 AL049745.1-201ENST00000433953 286 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.9□□□□□ -1.46
VTA1Q9NP79 RPS7P5-201ENST00000441482 581 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VTA1Q9NP79 NECAP1P2-201ENST00000455668 727 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 PNPLA4P1-201ENST00000458328 305 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.9□□□□□ -1.46
VTA1Q9NP79 AC092324.1-201ENST00000468671 324 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 RPL21P6-201ENST00000479171 504 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VTA1Q9NP79 VPS26AP1-201ENST00000483197 979 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 AC104971.1-201ENST00000495117 578 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.9□□□□□ -1.46
VTA1Q9NP79 AC073358.1-201ENST00000505671 684 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 GLUD1P3-202ENST00000508551 200 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
VTA1Q9NP79 AC010285.3-201ENST00000511668 676 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.9□□□□□ -1.46
VTA1Q9NP79 RNA5SP228-201ENST00000516232 133 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms