Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 PANDAR-201ENST00000629595 1506 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 GTF2IP4-201ENST00000453092 2054 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 PABPC1P9-201ENST00000426076 1612 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AC027228.2-201ENST00000567141 2154 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AL136984.1-201ENST00000607611 1893 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 RNU6-984P-201ENST00000363236 109 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AL157702.1-201ENST00000398764 426 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 RNU6-603P-201ENST00000411403 107 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AL663109.1-201ENST00000411498 844 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 METTL15P3-201ENST00000415522 1221 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 MTCO1P21-201ENST00000416634 589 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AC092647.1-201ENST00000420654 287 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AL354766.1-201ENST00000423396 542 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AL158073.1-201ENST00000426848 1104 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 PNKDP1-201ENST00000435914 430 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AL512286.1-201ENST00000439244 400 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 RPL23AP60-201ENST00000450011 454 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AC079140.3-201ENST00000511111 550 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AC090958.1-201ENST00000511122 351 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 RNA5SP206-201ENST00000516703 121 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 OR8Q1P-201ENST00000526467 655 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AP002963.1-201ENST00000530590 184 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AC136618.2-201ENST00000575091 400 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AC067773.1-201ENST00000603284 1094 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AC004987.4-201ENST00000603383 338 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 HSPE1P14-201ENST00000605812 302 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AC087752.4-201ENST00000605911 462 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AC004492.1-201ENST00000607036 742 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AC243773.3-201ENST00000613270 256 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AL121890.2-201ENST00000617644 465 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AL356596.1-201ENST00000624230 379 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 AC114774.1-201ENST00000507410 1770 ntBASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
TRIM55Q9BYV6 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.02□□□□□ -1.44
TRIM55Q9BYV6 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.44
TRIM55Q9BYV6 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.02□□□□□ -1.44
TRIM55Q9BYV6 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.02□□□□□ -1.45
TRIM55Q9BYV6 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM55Q9BYV6 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.02□□□□□ -1.45
TRIM55Q9BYV6 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM55Q9BYV6 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM55Q9BYV6 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM55Q9BYV6 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM55Q9BYV6 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM55Q9BYV6 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM55Q9BYV6 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM55Q9BYV6 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM55Q9BYV6 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
TRIM55Q9BYV6 CYP1D1P-201ENST00000416662 1433 ntBASIC6.02□□□□□ -1.45
TRIM55Q9BYV6 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.02□□□□□ -1.45
TRIM55Q9BYV6 AC016583.1-201ENST00000624221 2431 ntBASIC6.02□□□□□ -1.45
TRIM55Q9BYV6 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TRIM55Q9BYV6 COX6B1P3-201ENST00000312310 260 ntBASIC6.02□□□□□ -1.45
TRIM55Q9BYV6 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TRIM55Q9BYV6 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms