Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 SHQ1P1-201ENST00000437111 1544 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AL591135.1-201ENST00000401578 5914 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 DDX18P4-201ENST00000511690 1966 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 RNU6-216P-201ENST00000363282 104 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 Y_RNA.453-201ENST00000384223 109 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 SNORA51.12-201ENST00000384448 134 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 RPS24P12-201ENST00000402084 394 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 FCF1P10-201ENST00000407590 479 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AC138393.2-201ENST00000414742 246 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 TMBIM7P-201ENST00000418074 855 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AL953862.1-201ENST00000423016 168 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AL356583.2-201ENST00000426536 280 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AL138899.2-201ENST00000439139 499 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AL450263.2-201ENST00000439400 589 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 OR7E125P-201ENST00000443450 846 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 RPL26P28-201ENST00000451325 435 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 Z83838.1-202ENST00000456225 839 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AC023194.2-201ENST00000465398 406 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AF131216.2-201ENST00000512316 564 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 RNA5SP216-201ENST00000516111 123 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 SNORA48.10-201ENST00000516965 160 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AC093519.1-201ENST00000566109 298 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 MIR4420-201ENST00000583944 77 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 BNIP3P8-201ENST00000597863 560 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AC091488.1-201ENST00000604239 660 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AC112230.1-201ENST00000604342 547 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AL499605.1-201ENST00000604628 403 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AC092954.2-201ENST00000609103 430 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 Y_RNA.804-201ENST00000615262 101 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AL031658.2-201ENST00000616850 651 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AC093591.3-201ENST00000634516 308 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 Z95114.1-201ENST00000624264 14574 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AC092692.1-201ENST00000623625 2595 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 AP000432.2-201ENST00000624164 2048 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 MSL3P1-202ENST00000440028 1468 ntBASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD1Q96NR3 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 Y_RNA.372-201ENST00000365599 102 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 LCN1P2-201ENST00000372030 223 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AL360271.1-201ENST00000395679 510 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AL590002.1-201ENST00000406554 418 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 SNORA77.2-201ENST00000408571 112 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 Y_RNA.598-201ENST00000410480 95 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 RNU2-41P-201ENST00000410991 178 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms