Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AL356863.1-201ENST00000623378 1080 ntBASIC5.83□□□□□ -1.48
USP47Q96K76 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
USP47Q96K76 PCAT14-202ENST00000627127 3935 ntBASIC5.83□□□□□ -1.48
USP47Q96K76 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.83□□□□□ -1.48
USP47Q96K76 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.83□□□□□ -1.48
USP47Q96K76 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP47Q96K76 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
USP47Q96K76 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.83□□□□□ -1.48
USP47Q96K76 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.83□□□□□ -1.48
USP47Q96K76 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.83□□□□□ -1.48
USP47Q96K76 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP47Q96K76 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USP47Q96K76 RNA5SP130-201ENST00000364431 114 ntBASIC5.82□□□□□ -1.48
USP47Q96K76 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.82□□□□□ -1.48
USP47Q96K76 MIR554-201ENST00000384874 96 ntBASIC5.82□□□□□ -1.48
USP47Q96K76 MRPL50P1-201ENST00000431951 384 ntBASIC5.82□□□□□ -1.48
USP47Q96K76 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.82□□□□□ -1.48
USP47Q96K76 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.82□□□□□ -1.48
USP47Q96K76 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.82□□□□□ -1.48
USP47Q96K76 IFITM8P-201ENST00000522529 394 ntBASIC5.82□□□□□ -1.48
USP47Q96K76 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.82□□□□□ -1.48
USP47Q96K76 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.82□□□□□ -1.48
USP47Q96K76 MIR432-201ENST00000606207 94 ntBASIC5.82□□□□□ -1.48
USP47Q96K76 MIR6867-201ENST00000610636 67 ntBASIC5.82□□□□□ -1.48
USP47Q96K76 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.82□□□□□ -1.48
USP47Q96K76 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
USP47Q96K76 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
USP47Q96K76 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
USP47Q96K76 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USP47Q96K76 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
USP47Q96K76 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USP47Q96K76 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
USP47Q96K76 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
USP47Q96K76 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
USP47Q96K76 RNA5SP283-201ENST00000365604 119 ntBASIC5.81□□□□□ -1.48
USP47Q96K76 MIR670-201ENST00000390142 98 ntBASIC5.81□□□□□ -1.48
USP47Q96K76 AP000357.1-201ENST00000409926 1165 ntBASIC5.81□□□□□ -1.48
USP47Q96K76 RN7SKP202-201ENST00000410439 330 ntBASIC5.81□□□□□ -1.48
USP47Q96K76 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.81□□□□□ -1.48
USP47Q96K76 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.81□□□□□ -1.48
USP47Q96K76 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.81□□□□□ -1.48
USP47Q96K76 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
USP47Q96K76 TRGV7-201ENST00000427089 353 ntBASIC5.81□□□□□ -1.48
USP47Q96K76 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.81□□□□□ -1.48
USP47Q96K76 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.81□□□□□ -1.48
USP47Q96K76 RPL23AP89-201ENST00000439324 255 ntBASIC5.81□□□□□ -1.48
USP47Q96K76 ARAFP2-201ENST00000440565 559 ntBASIC5.81□□□□□ -1.48
USP47Q96K76 RPS26P28-201ENST00000470806 348 ntBASIC5.81□□□□□ -1.48
USP47Q96K76 AL132838.2-201ENST00000492041 314 ntBASIC5.81□□□□□ -1.48
USP47Q96K76 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.81□□□□□ -1.48
USP47Q96K76 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
USP47Q96K76 AC007599.1-201ENST00000568688 1174 ntBASIC5.81□□□□□ -1.48
USP47Q96K76 AC053481.3-201ENST00000577881 843 ntBASIC5.81□□□□□ -1.48
USP47Q96K76 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.81□□□□□ -1.48
USP47Q96K76 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.81□□□□□ -1.48
USP47Q96K76 OR7M1P-201ENST00000608946 533 ntBASIC5.81□□□□□ -1.48
USP47Q96K76 AC015922.4-201ENST00000612568 690 ntBASIC5.81□□□□□ -1.48
USP47Q96K76 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.81□□□□□ -1.48
USP47Q96K76 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
USP47Q96K76 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP47Q96K76 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.81□□□□□ -1.48
USP47Q96K76 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP47Q96K76 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
USP47Q96K76 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
USP47Q96K76 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
USP47Q96K76 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.8□□□□□ -1.48
USP47Q96K76 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.8□□□□□ -1.48
USP47Q96K76 HLA-N-201ENST00000437516 135 ntBASIC5.8□□□□□ -1.48
USP47Q96K76 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.8□□□□□ -1.48
USP47Q96K76 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.8□□□□□ -1.48
USP47Q96K76 RN7SL132P-201ENST00000478131 296 ntBASIC5.8□□□□□ -1.48
USP47Q96K76 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.8□□□□□ -1.48
USP47Q96K76 PPBPP1-201ENST00000510807 373 ntBASIC5.8□□□□□ -1.48
USP47Q96K76 MTND4LP31-201ENST00000514859 294 ntBASIC5.8□□□□□ -1.48
USP47Q96K76 RNU6-964P-201ENST00000516524 69 ntBASIC5.8□□□□□ -1.48
USP47Q96K76 FTH1P11-201ENST00000517577 551 ntBASIC5.8□□□□□ -1.48
USP47Q96K76 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
USP47Q96K76 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.8□□□□□ -1.48
USP47Q96K76 AC010608.2-201ENST00000624830 470 ntBASIC5.8□□□□□ -1.48
USP47Q96K76 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.8□□□□□ -1.48
USP47Q96K76 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
USP47Q96K76 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
USP47Q96K76 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
USP47Q96K76 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.8□□□□□ -1.48
USP47Q96K76 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
USP47Q96K76 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
USP47Q96K76 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.8□□□□□ -1.48
USP47Q96K76 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.8□□□□□ -1.48
USP47Q96K76 OR11H4-201ENST00000315409 1082 ntBASIC5.8□□□□□ -1.48
USP47Q96K76 SNORA62.3-201ENST00000365110 153 ntBASIC5.8□□□□□ -1.48
USP47Q96K76 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
USP47Q96K76 GSTM3P2-201ENST00000412746 530 ntBASIC5.8□□□□□ -1.48
USP47Q96K76 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.8□□□□□ -1.48
USP47Q96K76 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.8□□□□□ -1.48
USP47Q96K76 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.8□□□□□ -1.48
USP47Q96K76 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.8□□□□□ -1.48
USP47Q96K76 RPS4XP12-201ENST00000461747 709 ntBASIC5.8□□□□□ -1.48
USP47Q96K76 AC006517.1-201ENST00000480485 328 ntBASIC5.8□□□□□ -1.48
USP47Q96K76 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.8□□□□□ -1.48
USP47Q96K76 RNA5SP143-201ENST00000516936 115 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms