Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 RN7SKP199-201ENST00000410325 305 ntBASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 AC011933.1-201ENST00000413334 321 ntBASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 CEACAMP8-201ENST00000413902 580 ntBASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 RPS3AP54-201ENST00000435535 734 ntBASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 AC073587.1-201ENST00000447093 876 ntBASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 AC116533.1-201ENST00000459748 321 ntBASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 RPS23P7-201ENST00000466210 444 ntBASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 AC026979.1-201ENST00000492525 396 ntBASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 MIR3138-201ENST00000585238 82 ntBASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 AL354984.3-201ENST00000604803 325 ntBASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 AC005962.2-201ENST00000611427 652 ntBASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 AC114781.5-201ENST00000615297 108 ntBASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 MIR6758-201ENST00000620653 63 ntBASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 AC067931.1-201ENST00000624190 671 ntBASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 AL356489.2-201ENST00000566968 3528 ntBASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 HSPD1P11-201ENST00000508643 1702 ntBASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 AC092435.4-201ENST00000623012 4159 ntBASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 AL356317.1-201ENST00000396110 1436 ntBASIC4.37□□□□□ -1.71
ECHDC3Q96DC8 AC087190.4-201ENST00000574616 8334 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 ASNSP1-201ENST00000518311 1939 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 MAPK10-349ENST00000641767 3661 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 RNU1-132P-201ENST00000364300 164 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 RNA5SP22-201ENST00000365393 109 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 RNA5SP366-201ENST00000365454 123 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 AL583835.1-201ENST00000399570 407 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 P2RY10P2-201ENST00000416730 913 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 CYCSP10-201ENST00000417973 294 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 MTND4LP13-201ENST00000425022 298 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 AL157831.1-201ENST00000426134 473 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 C4BPAP2-201ENST00000428434 478 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 AL512326.1-201ENST00000443050 721 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 RPS27AP15-201ENST00000447672 466 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 RPL35AP15-201ENST00000468042 339 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 AC022336.1-201ENST00000475510 337 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 RN7SL817P-201ENST00000480777 288 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 AC041039.1-201ENST00000485656 536 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 AC091167.1-201ENST00000492017 396 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 AC010374.1-201ENST00000503762 1237 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 AC025857.1-201ENST00000525252 377 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 AL352979.3-201ENST00000553515 247 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 AC008759.1-201ENST00000589783 983 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 AP000843.1-201ENST00000624880 701 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 AL139254.3-201ENST00000641097 674 ntBASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.36□□□□□ -1.71
ECHDC3Q96DC8 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 AL158163.1-201ENST00000603915 1649 ntBASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 AC093535.2-201ENST00000624769 2326 ntBASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 AP001273.1-201ENST00000624493 3152 ntBASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 AP000756.2-201ENST00000624168 2567 ntBASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 RNA5SP175-201ENST00000364275 119 ntBASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 RPL21P108-201ENST00000413857 481 ntBASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 AC004448.2-201ENST00000422360 586 ntBASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 RPS20P1-201ENST00000434853 354 ntBASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms