Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 SCARNA22-201ENST00000503991 125 ntBASIC4.88□□□□□ -1.63
HDAC11Q96DB2 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HDAC11Q96DB2 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.88□□□□□ -1.63
HDAC11Q96DB2 RNA5SP464-201ENST00000516251 108 ntBASIC4.88□□□□□ -1.63
HDAC11Q96DB2 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.88□□□□□ -1.63
HDAC11Q96DB2 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.88□□□□□ -1.63
HDAC11Q96DB2 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.88□□□□□ -1.63
HDAC11Q96DB2 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.88□□□□□ -1.63
HDAC11Q96DB2 UBTFL9-201ENST00000534504 1148 ntBASIC4.88□□□□□ -1.63
HDAC11Q96DB2 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.88□□□□□ -1.63
HDAC11Q96DB2 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.88□□□□□ -1.63
HDAC11Q96DB2 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.88□□□□□ -1.63
HDAC11Q96DB2 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.88□□□□□ -1.63
HDAC11Q96DB2 MIR3934-201ENST00000579806 107 ntBASIC4.88□□□□□ -1.63
HDAC11Q96DB2 MIR4480-201ENST00000582492 71 ntBASIC4.88□□□□□ -1.63
HDAC11Q96DB2 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.88□□□□□ -1.63
HDAC11Q96DB2 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.88□□□□□ -1.63
HDAC11Q96DB2 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.88□□□□□ -1.63
HDAC11Q96DB2 AC139769.3-201ENST00000618383 175 ntBASIC4.88□□□□□ -1.63
HDAC11Q96DB2 AC015804.1-201ENST00000622935 435 ntBASIC4.88□□□□□ -1.63
HDAC11Q96DB2 AC015726.3-201ENST00000624501 418 ntBASIC4.88□□□□□ -1.63
HDAC11Q96DB2 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HDAC11Q96DB2 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HDAC11Q96DB2 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.88□□□□□ -1.63
HDAC11Q96DB2 VN2R3P-201ENST00000422626 1412 ntBASIC4.88□□□□□ -1.63
HDAC11Q96DB2 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.88□□□□□ -1.63
HDAC11Q96DB2 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 IGKV7-3-201ENST00000357453 298 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 RNU6-609P-201ENST00000365459 107 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 MIR92A2-201ENST00000385299 75 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 RNU4-27P-201ENST00000410889 139 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 EIF4A1P1-201ENST00000420241 934 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 PNRC2P1-201ENST00000423940 420 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 VN1R42P-201ENST00000424651 344 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AP000949.1-201ENST00000438328 629 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 RWDD4P1-201ENST00000488019 565 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AC073358.1-201ENST00000505671 684 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AC091868.1-201ENST00000508746 304 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 MTND1P36-201ENST00000522384 936 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AC107918.3-201ENST00000533272 382 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 PDCD5P1-201ENST00000543528 309 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 MIR4330-201ENST00000579077 105 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 PSMA6P4-201ENST00000603247 718 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AC079610.2-201ENST00000604818 690 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AC010200.2-201ENST00000605098 235 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AC092574.1-201ENST00000609771 420 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AC084824.5-201ENST00000612009 413 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 MIR7973-1-201ENST00000614683 76 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AL445528.2-201ENST00000620582 470 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AC106730.3-201ENST00000624568 641 ntBASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HDAC11Q96DB2 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HDAC11Q96DB2 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HDAC11Q96DB2 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HDAC11Q96DB2 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HDAC11Q96DB2 AC010329.2-201ENST00000595195 2737 ntBASIC4.86□□□□□ -1.63
HDAC11Q96DB2 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HDAC11Q96DB2 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HDAC11Q96DB2 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HDAC11Q96DB2 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HDAC11Q96DB2 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HDAC11Q96DB2 RNA5SP113-201ENST00000410486 84 ntBASIC4.86□□□□□ -1.63
HDAC11Q96DB2 OR51B3P-201ENST00000412287 913 ntBASIC4.86□□□□□ -1.63
HDAC11Q96DB2 AL590609.2-201ENST00000421430 368 ntBASIC4.86□□□□□ -1.63
HDAC11Q96DB2 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.86□□□□□ -1.63
HDAC11Q96DB2 AL353093.1-201ENST00000441292 436 ntBASIC4.86□□□□□ -1.63
HDAC11Q96DB2 RPL31P44-201ENST00000447680 377 ntBASIC4.86□□□□□ -1.63
HDAC11Q96DB2 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.86□□□□□ -1.63
HDAC11Q96DB2 CYCSP42-201ENST00000450823 238 ntBASIC4.86□□□□□ -1.63
HDAC11Q96DB2 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HDAC11Q96DB2 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms