Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 MTCO1P6-201ENST00000481192 1384 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 RN7SKP74-201ENST00000362849 309 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 OR52E6-202ENST00000379946 954 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 XKRYP1-201ENST00000423438 492 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 XKRYP2-201ENST00000432915 492 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 RHOT1P3-201ENST00000436571 331 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 AL031663.1-201ENST00000437445 219 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 AL591719.1-201ENST00000444669 744 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 Z80107.2-201ENST00000445127 392 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 AC073850.1-201ENST00000449243 255 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 AL935212.3-201ENST00000450729 284 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 AL139824.2-201ENST00000458731 1095 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 AC091959.2-201ENST00000477363 321 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 AC124293.1-201ENST00000530034 493 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 AC022832.1-201ENST00000530718 645 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 AP001542.2-201ENST00000593141 364 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 AC068313.1-201ENST00000604028 1008 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 Mico1.1-201ENST00000611698 204 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 AC009159.2-201ENST00000617603 606 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 AC090527.3-201ENST00000619041 548 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 AC099494.2-201ENST00000623371 978 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 AP000676.4-201ENST00000624659 623 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 GMFB-210ENST00000628554 639 ntTSL 4 BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 OR6C71P-202ENST00000641886 1107 ntBASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 AC096656.1-201ENST00000623826 1364 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 SNORA17.1-201ENST00000362945 126 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 U3.3-201ENST00000362986 216 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 RN7SKP113-201ENST00000363891 295 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 RNU4-68P-201ENST00000364314 141 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 RNU6-317P-201ENST00000384031 107 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 MTCO1P56-201ENST00000401674 224 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 AL589647.1-201ENST00000402485 466 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 RN7SKP97-201ENST00000410966 333 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 OR6C64P-201ENST00000419708 825 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 MTCYBP42-201ENST00000444653 1130 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 HMGB3P6-201ENST00000444896 598 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 AL929288.2-201ENST00000446368 407 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 DNAJC19P8-201ENST00000452887 259 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 AC069528.1-202ENST00000482888 637 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 MTCO3P35-201ENST00000485582 781 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 RN7SL441P-201ENST00000492388 296 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 RN7SL591P-201ENST00000496150 292 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 MTND4LP2-201ENST00000502312 285 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 AC097173.1-201ENST00000505862 819 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 DEFB130C-202ENST00000530001 230 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 AC024940.3-201ENST00000538551 316 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 BNIP3P4-201ENST00000604946 565 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 AC023813.4-201ENST00000607580 580 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 AC010975.3-201ENST00000618727 978 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms