Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 AL731566.1-201ENST00000620490 1937 ntBASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 RNU1-85P-201ENST00000364127 164 ntBASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 SNORA48.7-201ENST00000391302 135 ntBASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 RN7SKP267-201ENST00000410381 285 ntBASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 AC104333.2-201ENST00000422630 192 ntBASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 AL590623.1-201ENST00000427864 105 ntBASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 AC023141.6-201ENST00000429418 337 ntBASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 MTCO1P52-201ENST00000433928 531 ntBASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 AC079168.2-201ENST00000453977 416 ntBASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 RN7SL41P-201ENST00000476144 297 ntBASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 AC021242.1-201ENST00000507315 2035 ntBASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 AC084757.1-201ENST00000559987 490 ntBASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 AL109618.2-201ENST00000605527 211 ntBASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 OR7A19P-201ENST00000608051 733 ntBASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 AC110792.4-201ENST00000609843 298 ntBASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 AC243654.2-201ENST00000612843 443 ntBASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 AP004607.9-201ENST00000618202 316 ntBASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 AL035461.2-201ENST00000619201 524 ntBASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 AC006453.5-201ENST00000636451 619 ntBASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 OR2L1P-202ENST00000641567 1023 ntBASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.76□□□□□ -1.65
HDDC3Q8N4P3 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 AL731532.2-201ENST00000623542 1953 ntBASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 AL118496.1-201ENST00000440201 1812 ntBASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 MIR23B-201ENST00000384832 97 ntBASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 AC140479.3-201ENST00000418944 1126 ntBASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 CBX1P4-201ENST00000439415 457 ntBASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 RPL34P26-201ENST00000445636 354 ntBASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 AC010683.1-201ENST00000473673 378 ntBASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 MTCO1P31-201ENST00000506355 492 ntBASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 AC015795.1-201ENST00000513669 327 ntBASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 MIR3936-201ENST00000584304 110 ntBASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 AC073091.2-201ENST00000603205 907 ntBASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 AL355816.1-201ENST00000607951 118 ntBASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 AL096803.3-201ENST00000609032 532 ntBASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 Z95327.2-201ENST00000414579 1873 ntBASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.75□□□□□ -1.65
HDDC3Q8N4P3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HDDC3Q8N4P3 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.74□□□□□ -1.65
HDDC3Q8N4P3 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.74□□□□□ -1.65
HDDC3Q8N4P3 AL049555.1-201ENST00000562834 1933 ntBASIC4.74□□□□□ -1.65
HDDC3Q8N4P3 LINC01355-201ENST00000566551 5444 ntBASIC4.74□□□□□ -1.65
HDDC3Q8N4P3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms