Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC017007.4-201ENST00000503353 1352 ntBASIC5.4□□□□□ -1.55
SLC44A3Q8N4M1 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 RNA5SP453-201ENST00000362503 119 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 RNU6-304P-201ENST00000364855 107 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 PEX12P1-201ENST00000400284 1048 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 RNU2-50P-201ENST00000410494 143 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 OR5BE1P-201ENST00000425977 939 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 AL593851.1-201ENST00000426171 157 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 COX7BP2-201ENST00000437976 242 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 ELOCP8-201ENST00000439309 332 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 ELOCP15-201ENST00000442090 332 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 OR51B8P-201ENST00000449892 769 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 NECAP1P2-201ENST00000455668 727 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 ANKRD26P4-201ENST00000455755 950 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 SNORD125-201ENST00000459538 96 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 RN7SL188P-201ENST00000469842 285 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 RN7SL244P-201ENST00000493405 297 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 FABP5P12-201ENST00000515543 389 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 RNU6-759P-201ENST00000516740 103 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 DEFB130C-202ENST00000530001 230 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 AP006289.1-201ENST00000538089 277 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 AC011611.5-201ENST00000552477 578 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 BGLT3-201ENST00000564523 994 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 AC022662.1-201ENST00000580252 331 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 AL031985.2-201ENST00000600955 480 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 AC068790.4-201ENST00000602474 263 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 NTAN1P1-201ENST00000603150 646 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 AC013468.1-201ENST00000608680 598 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 OR5BE1P-202ENST00000641168 1176 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 AC116158.1-201ENST00000560231 2129 ntBASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A3Q8N4M1 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 AC109446.4-201ENST00000623235 2755 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 AC138907.8-201ENST00000623981 2256 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 AC126755.2-208ENST00000327792 462 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 AC138969.1-213ENST00000331436 462 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 RNU1-87P-201ENST00000363727 170 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 RN7SKP113-201ENST00000363891 295 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 RNA5SP428-201ENST00000365129 132 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 ATP5F1P3-201ENST00000397213 657 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 DNAJC19P7-201ENST00000428811 344 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 MTND1P32-201ENST00000433043 938 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 AC098826.1-201ENST00000433943 471 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 CASP3P1-201ENST00000446037 609 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 TPT1P12-201ENST00000448968 492 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms