Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 SCN1A-220ENST00000641603 12506 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 AC009501.3-201ENST00000605001 1352 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 AC008033.1-201ENST00000216407 1162 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 VDAC2P1-201ENST00000399358 958 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 AL136131.1-201ENST00000406079 803 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 UBE2V1P15-201ENST00000407776 448 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 AL160275.2-201ENST00000412010 394 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 RANP4-201ENST00000413361 655 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 AC009237.10-201ENST00000414112 510 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 GTF2IP2-201ENST00000424290 697 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 MTND4P15-201ENST00000437913 1033 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 DHFRP3-201ENST00000455595 559 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 HSPE1P22-201ENST00000456856 327 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 MTCO1P31-201ENST00000506355 492 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 RNA5SP497-201ENST00000516081 97 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 OR8K2P-201ENST00000524645 927 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 LINC00557-201ENST00000563184 1279 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 AC122134.1-201ENST00000565664 1104 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 AC005191.1-201ENST00000603950 358 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 AL356218.2-201ENST00000605264 187 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 AC090948.1-201ENST00000607464 549 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 AC020923.1-201ENST00000624021 917 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 TTC39DP-201ENST00000416781 1688 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 SPATA2P1-201ENST00000431223 2055 ntBASIC4.12□□□□□ -1.75
C9orf40Q8IXQ3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 MTCO1P15-201ENST00000529569 1526 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AP001002.1-201ENST00000625148 1513 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AC007342.7-201ENST00000624610 2337 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 SNORD115-48-201ENST00000364764 76 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 RNU6-31P-201ENST00000384388 108 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 RPL21P108-201ENST00000413857 481 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AL139095.3-201ENST00000419672 1203 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AC062016.2-201ENST00000420950 676 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 OR2X1P-201ENST00000421144 687 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 EIF4EP1-201ENST00000422311 642 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 MTND4P24-201ENST00000424002 397 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 RPL12P34-201ENST00000424532 479 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 RPL18P10-201ENST00000425606 538 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 RPL23AP25-201ENST00000430973 463 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 CDY14P-201ENST00000431260 1014 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 PPIAP13-201ENST00000434706 478 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 CDY12P-201ENST00000440679 1015 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 XKRY2-201ENST00000442362 1093 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 CDY13P-201ENST00000445813 1015 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AC009220.1-201ENST00000451614 275 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 CDY23P-201ENST00000451661 1014 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 RPL23AP24-201ENST00000458203 385 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 ATP5G1P3-201ENST00000463301 410 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 215.7 ms