Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC094019.1-201ENST00000434678 472 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 MRPS21P3-201ENST00000436696 262 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 MORF4-201ENST00000447135 971 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 RPL23AP20-201ENST00000447965 421 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 TRGVB-201ENST00000453257 471 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 C1DP4-201ENST00000455429 424 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC099563.1-201ENST00000456086 418 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 MEMO1P3-201ENST00000459811 302 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 RPL38P1-201ENST00000460914 211 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 RN7SL221P-201ENST00000466190 281 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 RN7SL836P-201ENST00000476140 296 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC008629.2-201ENST00000503783 483 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 OR4D12P-201ENST00000509361 911 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC010343.2-201ENST00000510162 224 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 snoU109.5-201ENST00000516231 132 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 COX6B1P6-201ENST00000522347 255 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 CYCSP25-201ENST00000525280 316 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC022832.1-201ENST00000530718 645 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 NMNAT1P1-201ENST00000554095 876 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 RPS3AP23-202ENST00000574601 686 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC087283.1-201ENST00000604029 1074 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC013553.2-201ENST00000604244 589 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AL136295.6-201ENST00000610486 658 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC006924.1-201ENST00000610750 559 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC006504.8-201ENST00000621046 635 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC006511.3-201ENST00000624929 1783 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AOX3P-204ENST00000491025 2107 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC116158.1-201ENST00000560231 2129 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC004014.2-201ENST00000623718 5122 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC090220.1-201ENST00000593078 1699 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AC078880.4-201ENST00000617627 1749 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AC092692.1-201ENST00000623625 2595 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 RNY4P34-201ENST00000364779 95 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 MIR433-201ENST00000384837 93 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 PEX12P1-201ENST00000400284 1048 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 RN7SKP146-201ENST00000410242 334 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 RN7SKP121-201ENST00000410842 305 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AC017078.1-201ENST00000416146 368 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AC005534.2-201ENST00000431047 433 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 MTCO1P27-201ENST00000448269 226 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 Z82190.1-201ENST00000454534 490 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AC022364.2-201ENST00000457963 554 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 RN7SL326P-201ENST00000477493 296 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AC025674.1-201ENST00000507074 324 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 KHDC1P1-201ENST00000511053 508 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AC093816.1-201ENST00000515076 913 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms