Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 OR4F13P-202ENST00000560066 2054 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AL450345.1-202ENST00000605741 3881 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AL159987.1-201ENST00000347911 293 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 RNA5SP30-201ENST00000365552 115 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 OR1L6-202ENST00000373684 1044 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 SUGT1P2-201ENST00000379452 992 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 SNORD116-8-201ENST00000384365 95 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 RNU6-146P-201ENST00000384602 108 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AC005042.1-201ENST00000393397 800 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 RSL24D1P4-201ENST00000400938 484 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AL121978.1-201ENST00000402778 359 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 MTCO3P31-201ENST00000405526 789 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 MIR1203-201ENST00000408812 85 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 RNU6-757P-201ENST00000410334 100 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 RNA5SP296-201ENST00000410523 111 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 FCF1P2-201ENST00000415284 583 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 MTND2P18-201ENST00000419962 1030 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 MFSD13B-201ENST00000420133 1290 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 OR2AH1P-201ENST00000425717 928 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 HSPD1P12-201ENST00000429127 1069 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AC069154.1-201ENST00000432914 542 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AC241584.1-201ENST00000438469 1241 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 Z83846.1-201ENST00000446798 265 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AL596266.1-201ENST00000448132 400 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AC090804.1-201ENST00000448870 490 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 ART2BP-201ENST00000453501 499 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 MTND6P6-201ENST00000478031 263 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 ACTG1P13-201ENST00000486987 1043 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AC009120.1-201ENST00000493458 473 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 FTH1P24-201ENST00000503502 462 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AC010587.2-201ENST00000511727 448 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 RFPL4AP5-201ENST00000514977 504 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 RNU6-941P-201ENST00000516346 108 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 RNA5SP438-201ENST00000516561 112 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 IGLV3-30-201ENST00000524362 298 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 OR5M2P-201ENST00000529003 936 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 OR8G3P-201ENST00000533406 921 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 HIGD1AP17-201ENST00000554576 276 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AC090515.3-201ENST00000560431 315 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AC116553.2-201ENST00000564203 463 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AC018638.7-201ENST00000605836 1114 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AC131235.4-201ENST00000609288 620 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AC026634.1-201ENST00000634369 198 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AC116618.1-201ENST00000634617 774 ntBASIC5.23□□□□□ -1.57
RNF220Q5VTB9 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNF220Q5VTB9 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 SMG1P6-201ENST00000532337 2930 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms