Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 RPL23AP15-201ENST00000450202 459 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 DNAJB5P1-201ENST00000454004 806 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AL109741.2-201ENST00000455561 343 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AC010307.1-201ENST00000467206 836 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 RN7SL329P-201ENST00000467740 299 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 RPS21P4-201ENST00000487122 248 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AC072052.1-201ENST00000496556 306 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AC105384.2-201ENST00000508433 640 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AC010587.2-201ENST00000511727 448 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 ELOCP32-201ENST00000548625 324 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AL049779.2-201ENST00000553847 315 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 MIR4700-201ENST00000578311 74 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 RPSAP73-201ENST00000614820 330 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AC069209.1-201ENST00000619282 651 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AC239868.2-201ENST00000564237 4527 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 SGO1P2-201ENST00000429458 1589 ntBASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 TCP11X1-202ENST00000622971 1372 ntBASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AL121978.1-201ENST00000402778 359 ntBASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 PRRC2CP1-201ENST00000404428 159 ntBASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 RNU6-757P-201ENST00000410334 100 ntBASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AL133482.1-201ENST00000415988 498 ntBASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AL050321.1-201ENST00000432363 400 ntBASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AL354941.1-201ENST00000438600 464 ntBASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 PPIAP21-201ENST00000464473 501 ntBASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 MTND1P16-201ENST00000465177 898 ntBASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 ACTG1P13-201ENST00000486987 1043 ntBASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AC104090.1-201ENST00000506341 1171 ntBASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AC008015.1-201ENST00000555505 465 ntBASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AL109653.1-201ENST00000603091 248 ntBASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AC069304.3-201ENST00000603938 1084 ntBASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AL445222.1-201ENST00000607259 628 ntBASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AL354760.1-201ENST00000608357 643 ntBASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AC026634.1-201ENST00000634369 198 ntBASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 MIR3974-201ENST00000637126 96 ntBASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AC103706.2-201ENST00000638080 240 ntBASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 STX3-208ENST00000641815 3236 ntBASIC6.37□□□□□ -1.39
CCDC144BQ3MJ40 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 237.1 ms