Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX1Q15475 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX1Q15475 AC074367.1-201ENST00000438685 1125 ntBASIC4.46□□□□□ -1.7
SIX1Q15475 H2AFZP6-201ENST00000444403 394 ntBASIC4.46□□□□□ -1.7
SIX1Q15475 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.46□□□□□ -1.7
SIX1Q15475 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.46□□□□□ -1.7
SIX1Q15475 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX1Q15475 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.46□□□□□ -1.7
SIX1Q15475 AC008628.1-201ENST00000508663 265 ntBASIC4.46□□□□□ -1.7
SIX1Q15475 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.46□□□□□ -1.7
SIX1Q15475 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.46□□□□□ -1.7
SIX1Q15475 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.46□□□□□ -1.7
SIX1Q15475 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.46□□□□□ -1.7
SIX1Q15475 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX1Q15475 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.46□□□□□ -1.7
SIX1Q15475 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX1Q15475 MIR4270-201ENST00000581799 70 ntBASIC4.46□□□□□ -1.7
SIX1Q15475 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.46□□□□□ -1.7
SIX1Q15475 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.46□□□□□ -1.7
SIX1Q15475 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.46□□□□□ -1.7
SIX1Q15475 AC012603.1-201ENST00000606424 528 ntBASIC4.46□□□□□ -1.7
SIX1Q15475 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.46□□□□□ -1.7
SIX1Q15475 AL512506.1-201ENST00000613918 449 ntBASIC4.46□□□□□ -1.7
SIX1Q15475 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX1Q15475 AL021997.2-201ENST00000615674 271 ntBASIC4.46□□□□□ -1.7
SIX1Q15475 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.46□□□□□ -1.7
SIX1Q15475 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX1Q15475 AP003499.2-201ENST00000624100 483 ntBASIC4.46□□□□□ -1.7
SIX1Q15475 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SIX1Q15475 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
SIX1Q15475 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.46□□□□□ -1.7
SIX1Q15475 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SIX1Q15475 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SIX1Q15475 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
SIX1Q15475 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SIX1Q15475 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SIX1Q15475 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SIX1Q15475 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SIX1Q15475 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SIX1Q15475 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SIX1Q15475 KPNA2P2-201ENST00000419546 1489 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SIX1Q15475 AC005332.5-201ENST00000591222 2919 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SIX1Q15475 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SIX1Q15475 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SIX1Q15475 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.45□□□□□ -1.7
SIX1Q15475 SNORA37-201ENST00000384504 129 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 TMSB10P2-201ENST00000416049 131 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 UQCRBP1-201ENST00000421129 336 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.45□□□□□ -1.7
SIX1Q15475 AC073464.3-201ENST00000422564 712 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 AL034379.1-201ENST00000423216 253 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 RBMY1KP-201ENST00000423480 476 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 RPEP3-201ENST00000425462 676 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 BX119904.1-201ENST00000432026 348 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 ELOCP18-201ENST00000434209 337 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.45□□□□□ -1.7
SIX1Q15475 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SIX1Q15475 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SIX1Q15475 AP002345.1-201ENST00000456493 928 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 EIF2S2P4-201ENST00000461070 984 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 RN7SL585P-201ENST00000470538 280 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.45□□□□□ -1.7
SIX1Q15475 AC090543.1-201ENST00000492168 485 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.45□□□□□ -1.7
SIX1Q15475 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.45□□□□□ -1.7
SIX1Q15475 BNIP3P41-201ENST00000503774 571 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 AC092593.2-201ENST00000513866 913 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.45□□□□□ -1.7
SIX1Q15475 HIGD1AP5-201ENST00000529959 259 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 AC063949.1-201ENST00000552900 865 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 AC084783.1-201ENST00000565846 910 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 AL133247.2-201ENST00000603236 482 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.45□□□□□ -1.7
SIX1Q15475 AC067838.1-201ENST00000606064 577 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 AC006213.4-201ENST00000616184 634 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 AC010435.1-201ENST00000623353 1177 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.45□□□□□ -1.7
SIX1Q15475 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
SIX1Q15475 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.45□□□□□ -1.7
SIX1Q15475 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.45□□□□□ -1.7
SIX1Q15475 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SIX1Q15475 SAMMSON-213ENST00000641336 1521 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SIX1Q15475 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
SIX1Q15475 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
SIX1Q15475 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SIX1Q15475 RAD17P1-201ENST00000418130 2042 ntBASIC4.45□□□□□ -1.7
SIX1Q15475 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.45□□□□□ -1.7
SIX1Q15475 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.45□□□□□ -1.7
SIX1Q15475 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SIX1Q15475 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SIX1Q15475 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.44□□□□□ -1.7
SIX1Q15475 AC097504.1-201ENST00000515103 2415 ntBASIC4.44□□□□□ -1.7
SIX1Q15475 AL512283.1-201ENST00000606756 1384 ntBASIC4.44□□□□□ -1.7
SIX1Q15475 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.44□□□□□ -1.7
SIX1Q15475 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SIX1Q15475 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SIX1Q15475 RNU6-40P-201ENST00000384254 107 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms