Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC114495.1-201ENST00000441274 436 ntBASIC5.06□□□□□ -1.6
CCNA1P78396 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.06□□□□□ -1.6
CCNA1P78396 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.06□□□□□ -1.6
CCNA1P78396 BTF3P6-201ENST00000448054 499 ntBASIC5.06□□□□□ -1.6
CCNA1P78396 RHEBP2-201ENST00000450289 600 ntBASIC5.06□□□□□ -1.6
CCNA1P78396 AC069277.2-201ENST00000454211 432 ntBASIC5.06□□□□□ -1.6
CCNA1P78396 AC099560.2-201ENST00000457554 255 ntBASIC5.06□□□□□ -1.6
CCNA1P78396 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.06□□□□□ -1.6
CCNA1P78396 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
CCNA1P78396 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.06□□□□□ -1.6
CCNA1P78396 AL133372.1-201ENST00000493565 745 ntBASIC5.06□□□□□ -1.6
CCNA1P78396 USP9YP2-201ENST00000504503 1000 ntBASIC5.06□□□□□ -1.6
CCNA1P78396 AC113398.2-201ENST00000507630 558 ntBASIC5.06□□□□□ -1.6
CCNA1P78396 USP9YP1-201ENST00000513521 1002 ntBASIC5.06□□□□□ -1.6
CCNA1P78396 RNU6-319P-201ENST00000516025 108 ntBASIC5.06□□□□□ -1.6
CCNA1P78396 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.06□□□□□ -1.6
CCNA1P78396 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.06□□□□□ -1.6
CCNA1P78396 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.06□□□□□ -1.6
CCNA1P78396 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.06□□□□□ -1.6
CCNA1P78396 MIR4472-2-201ENST00000582069 67 ntBASIC5.06□□□□□ -1.6
CCNA1P78396 SNX6P1-201ENST00000601728 1224 ntBASIC5.06□□□□□ -1.6
CCNA1P78396 AC019131.2-201ENST00000609071 870 ntBASIC5.06□□□□□ -1.6
CCNA1P78396 MIR6891-201ENST00000618788 93 ntBASIC5.06□□□□□ -1.6
CCNA1P78396 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.06□□□□□ -1.6
CCNA1P78396 AC015722.2-201ENST00000622210 551 ntBASIC5.06□□□□□ -1.6
CCNA1P78396 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
CCNA1P78396 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.06□□□□□ -1.6
CCNA1P78396 AC027290.2-201ENST00000623210 18662 ntBASIC5.06□□□□□ -1.6
CCNA1P78396 DHX9P1-201ENST00000436565 3076 ntBASIC5.06□□□□□ -1.6
CCNA1P78396 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCNA1P78396 TCP1P3-201ENST00000414406 1498 ntBASIC5.06□□□□□ -1.6
CCNA1P78396 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCNA1P78396 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCNA1P78396 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CCNA1P78396 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCNA1P78396 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.05□□□□□ -1.6
CCNA1P78396 AC139769.1-204ENST00000472297 1931 ntBASIC5.05□□□□□ -1.6
CCNA1P78396 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.05□□□□□ -1.6
CCNA1P78396 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.05□□□□□ -1.6
CCNA1P78396 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.05□□□□□ -1.6
CCNA1P78396 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CCNA1P78396 AL359837.1-201ENST00000381357 287 ntBASIC5.05□□□□□ -1.6
CCNA1P78396 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.05□□□□□ -1.6
CCNA1P78396 RPL32P23-201ENST00000397237 405 ntBASIC5.05□□□□□ -1.6
CCNA1P78396 OR6K4P-201ENST00000423179 955 ntBASIC5.05□□□□□ -1.6
CCNA1P78396 RPS26P47-201ENST00000427219 348 ntBASIC5.05□□□□□ -1.6
CCNA1P78396 GTF3AP5-201ENST00000442645 697 ntBASIC5.05□□□□□ -1.6
CCNA1P78396 Z95327.1-201ENST00000446082 482 ntBASIC5.05□□□□□ -1.6
CCNA1P78396 RPS6P2-201ENST00000454208 705 ntBASIC5.05□□□□□ -1.6
CCNA1P78396 AC022336.1-201ENST00000475510 337 ntBASIC5.05□□□□□ -1.6
CCNA1P78396 AL132838.2-201ENST00000492041 314 ntBASIC5.05□□□□□ -1.6
CCNA1P78396 PPM1AP1-201ENST00000502740 1135 ntBASIC5.05□□□□□ -1.6
CCNA1P78396 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.05□□□□□ -1.6
CCNA1P78396 AC020593.1-201ENST00000507399 299 ntBASIC5.05□□□□□ -1.6
CCNA1P78396 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.05□□□□□ -1.6
CCNA1P78396 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.05□□□□□ -1.6
CCNA1P78396 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.05□□□□□ -1.6
CCNA1P78396 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCNA1P78396 BNIP3P22-201ENST00000593399 556 ntBASIC5.05□□□□□ -1.6
CCNA1P78396 AL008729.2-201ENST00000606393 473 ntBASIC5.05□□□□□ -1.6
CCNA1P78396 MIR92B-201ENST00000607575 96 ntBASIC5.05□□□□□ -1.6
CCNA1P78396 AC099676.1-201ENST00000608886 657 ntBASIC5.05□□□□□ -1.6
CCNA1P78396 SNX18P1Y-201ENST00000616231 511 ntBASIC5.05□□□□□ -1.6
CCNA1P78396 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.05□□□□□ -1.6
CCNA1P78396 MAPK10-304ENST00000641341 3984 ntBASIC5.05□□□□□ -1.6
CCNA1P78396 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.05□□□□□ -1.6
CCNA1P78396 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CCNA1P78396 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCNA1P78396 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCNA1P78396 AC009229.4-201ENST00000623854 1947 ntBASIC5.05□□□□□ -1.6
CCNA1P78396 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.05□□□□□ -1.6
CCNA1P78396 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCNA1P78396 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCNA1P78396 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCNA1P78396 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CCNA1P78396 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCNA1P78396 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCNA1P78396 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.04□□□□□ -1.6
CCNA1P78396 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.04□□□□□ -1.6
CCNA1P78396 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.04□□□□□ -1.6
CCNA1P78396 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCNA1P78396 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.04□□□□□ -1.6
CCNA1P78396 OR56B2P-201ENST00000317102 954 ntBASIC5.04□□□□□ -1.6
CCNA1P78396 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCNA1P78396 RN7SKP74-201ENST00000362849 309 ntBASIC5.04□□□□□ -1.6
CCNA1P78396 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCNA1P78396 AL161909.1-201ENST00000397390 712 ntBASIC5.04□□□□□ -1.6
CCNA1P78396 AL139095.3-201ENST00000419672 1203 ntBASIC5.04□□□□□ -1.6
CCNA1P78396 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.04□□□□□ -1.6
CCNA1P78396 BTF3P10-201ENST00000433415 495 ntBASIC5.04□□□□□ -1.6
CCNA1P78396 AL512326.1-201ENST00000443050 721 ntBASIC5.04□□□□□ -1.6
CCNA1P78396 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCNA1P78396 SNORA84-201ENST00000459229 133 ntBASIC5.04□□□□□ -1.6
CCNA1P78396 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNA1P78396 RPL21P6-201ENST00000479171 504 ntBASIC5.04□□□□□ -1.6
CCNA1P78396 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.04□□□□□ -1.6
CCNA1P78396 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.04□□□□□ -1.6
CCNA1P78396 AC069304.1-201ENST00000491593 704 ntBASIC5.04□□□□□ -1.6
CCNA1P78396 RPS27AP13-201ENST00000498403 237 ntBASIC5.04□□□□□ -1.6
CCNA1P78396 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms