Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TPM4P67936 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TPM4P67936 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
TPM4P67936 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TPM4P67936 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.71□□□□□ -1.66
TPM4P67936 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.71□□□□□ -1.66
TPM4P67936 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
TPM4P67936 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.71□□□□□ -1.66
TPM4P67936 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TPM4P67936 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.71□□□□□ -1.66
TPM4P67936 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TPM4P67936 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.71□□□□□ -1.66
TPM4P67936 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.71□□□□□ -1.66
TPM4P67936 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.71□□□□□ -1.66
TPM4P67936 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.71□□□□□ -1.66
TPM4P67936 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.71□□□□□ -1.66
TPM4P67936 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.71□□□□□ -1.66
TPM4P67936 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.71□□□□□ -1.66
TPM4P67936 AP000676.2-201ENST00000529711 301 ntBASIC4.71□□□□□ -1.66
TPM4P67936 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.71□□□□□ -1.66
TPM4P67936 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.71□□□□□ -1.66
TPM4P67936 VN1R81P-201ENST00000602085 372 ntBASIC4.71□□□□□ -1.66
TPM4P67936 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TPM4P67936 OR8A1-204ENST00000642111 1145 ntBASIC4.71□□□□□ -1.66
TPM4P67936 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TPM4P67936 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
TPM4P67936 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TPM4P67936 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
TPM4P67936 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TPM4P67936 MIR365B-201ENST00000362317 111 ntBASIC4.7□□□□□ -1.66
TPM4P67936 RNU6-1331P-201ENST00000363658 106 ntBASIC4.7□□□□□ -1.66
TPM4P67936 MT-RNR1-201ENST00000389680 954 ntBASIC4.7□□□□□ -1.66
TPM4P67936 UQCRBP1-201ENST00000421129 336 ntBASIC4.7□□□□□ -1.66
TPM4P67936 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.7□□□□□ -1.66
TPM4P67936 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.7□□□□□ -1.66
TPM4P67936 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TPM4P67936 PPIAP17-201ENST00000438507 471 ntBASIC4.7□□□□□ -1.66
TPM4P67936 CASP3P1-201ENST00000446037 609 ntBASIC4.7□□□□□ -1.66
TPM4P67936 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.7□□□□□ -1.66
TPM4P67936 EIF4A1P11-201ENST00000451239 222 ntBASIC4.7□□□□□ -1.66
TPM4P67936 RPL23AP81-201ENST00000455252 467 ntBASIC4.7□□□□□ -1.66
TPM4P67936 DHFRP3-201ENST00000455595 559 ntBASIC4.7□□□□□ -1.66
TPM4P67936 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.7□□□□□ -1.66
TPM4P67936 RPS29P19-201ENST00000479709 171 ntBASIC4.7□□□□□ -1.66
TPM4P67936 IGKV2-38-201ENST00000517443 247 ntBASIC4.7□□□□□ -1.66
TPM4P67936 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.7□□□□□ -1.66
TPM4P67936 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.7□□□□□ -1.66
TPM4P67936 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.7□□□□□ -1.66
TPM4P67936 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.7□□□□□ -1.66
TPM4P67936 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.7□□□□□ -1.66
TPM4P67936 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.7□□□□□ -1.66
TPM4P67936 MIR3934-201ENST00000579806 107 ntBASIC4.7□□□□□ -1.66
TPM4P67936 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.7□□□□□ -1.66
TPM4P67936 AP003392.5-201ENST00000607857 415 ntBASIC4.7□□□□□ -1.66
TPM4P67936 AC021106.3-201ENST00000623925 531 ntBASIC4.7□□□□□ -1.66
TPM4P67936 AP005264.7-201ENST00000625003 745 ntBASIC4.7□□□□□ -1.66
TPM4P67936 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.7□□□□□ -1.66
TPM4P67936 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TPM4P67936 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TPM4P67936 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.7□□□□□ -1.66
TPM4P67936 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.7□□□□□ -1.66
TPM4P67936 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TPM4P67936 AC074029.4-201ENST00000624796 1859 ntBASIC4.69□□□□□ -1.66
TPM4P67936 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
TPM4P67936 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TPM4P67936 MTCO1P11-201ENST00000429111 1528 ntBASIC4.69□□□□□ -1.66
TPM4P67936 RNU6-984P-201ENST00000363236 109 ntBASIC4.69□□□□□ -1.66
TPM4P67936 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
TPM4P67936 AL138878.1-201ENST00000405131 347 ntBASIC4.69□□□□□ -1.66
TPM4P67936 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.69□□□□□ -1.66
TPM4P67936 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.69□□□□□ -1.66
TPM4P67936 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.69□□□□□ -1.66
TPM4P67936 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.69□□□□□ -1.66
TPM4P67936 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.69□□□□□ -1.66
TPM4P67936 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.69□□□□□ -1.66
TPM4P67936 FHP1-201ENST00000442741 703 ntBASIC4.69□□□□□ -1.66
TPM4P67936 AC069499.1-201ENST00000489433 509 ntBASIC4.69□□□□□ -1.66
TPM4P67936 RN7SL808P-201ENST00000496066 299 ntBASIC4.69□□□□□ -1.66
TPM4P67936 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.69□□□□□ -1.66
TPM4P67936 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.69□□□□□ -1.66
TPM4P67936 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.69□□□□□ -1.66
TPM4P67936 AC068446.3-201ENST00000555285 382 ntBASIC4.69□□□□□ -1.66
TPM4P67936 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.69□□□□□ -1.66
TPM4P67936 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.69□□□□□ -1.66
TPM4P67936 AC141257.3-201ENST00000572906 215 ntBASIC4.69□□□□□ -1.66
TPM4P67936 MTND2P13-201ENST00000577438 1039 ntBASIC4.69□□□□□ -1.66
TPM4P67936 MIR4646-201ENST00000580775 63 ntBASIC4.69□□□□□ -1.66
TPM4P67936 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.69□□□□□ -1.66
TPM4P67936 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TPM4P67936 BX005019.1-201ENST00000561881 1810 ntBASIC4.69□□□□□ -1.66
TPM4P67936 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
TPM4P67936 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
TPM4P67936 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TPM4P67936 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.68□□□□□ -1.66
TPM4P67936 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TPM4P67936 AL451142.2-201ENST00000429076 2090 ntBASIC4.68□□□□□ -1.66
TPM4P67936 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
TPM4P67936 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TPM4P67936 AL356489.2-201ENST00000566968 3528 ntBASIC4.68□□□□□ -1.66
TPM4P67936 FAM3C2-201ENST00000312214 681 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms