Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
ERVFC1P60507 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
ERVFC1P60507 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6.14□□□□□ -1.43
ERVFC1P60507 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ERVFC1P60507 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.14□□□□□ -1.43
ERVFC1P60507 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ERVFC1P60507 RNU6-621P-201ENST00000364752 109 ntBASIC6.14□□□□□ -1.43
ERVFC1P60507 RN7SKP226-201ENST00000364912 300 ntBASIC6.14□□□□□ -1.43
ERVFC1P60507 AL121977.1-201ENST00000401636 979 ntBASIC6.14□□□□□ -1.43
ERVFC1P60507 NCSTNP1-201ENST00000406229 144 ntBASIC6.14□□□□□ -1.43
ERVFC1P60507 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.14□□□□□ -1.43
ERVFC1P60507 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.14□□□□□ -1.43
ERVFC1P60507 AC007562.1-201ENST00000421819 517 ntBASIC6.14□□□□□ -1.43
ERVFC1P60507 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.14□□□□□ -1.43
ERVFC1P60507 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC6.14□□□□□ -1.43
ERVFC1P60507 AL451136.1-201ENST00000435399 325 ntBASIC6.14□□□□□ -1.43
ERVFC1P60507 USP9YP8-201ENST00000441913 500 ntBASIC6.14□□□□□ -1.43
ERVFC1P60507 AC023274.2-201ENST00000445264 521 ntBASIC6.14□□□□□ -1.43
ERVFC1P60507 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.14□□□□□ -1.43
ERVFC1P60507 AC079776.3-201ENST00000450665 370 ntBASIC6.14□□□□□ -1.43
ERVFC1P60507 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC6.14□□□□□ -1.43
ERVFC1P60507 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC6.14□□□□□ -1.43
ERVFC1P60507 AC146507.1-201ENST00000468335 354 ntBASIC6.14□□□□□ -1.43
ERVFC1P60507 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC6.14□□□□□ -1.43
ERVFC1P60507 ATP1B1P1-201ENST00000509767 915 ntBASIC6.14□□□□□ -1.43
ERVFC1P60507 AC022483.1-201ENST00000514020 567 ntBASIC6.14□□□□□ -1.43
ERVFC1P60507 RNU6-875P-201ENST00000516488 106 ntBASIC6.14□□□□□ -1.43
ERVFC1P60507 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.14□□□□□ -1.43
ERVFC1P60507 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ERVFC1P60507 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.14□□□□□ -1.43
ERVFC1P60507 AC005832.3-201ENST00000537929 631 ntBASIC6.14□□□□□ -1.43
ERVFC1P60507 YWHABP2-201ENST00000540201 713 ntBASIC6.14□□□□□ -1.43
ERVFC1P60507 AC044913.1-201ENST00000557200 430 ntBASIC6.14□□□□□ -1.43
ERVFC1P60507 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.14□□□□□ -1.43
ERVFC1P60507 RBM22P12-201ENST00000567098 1255 ntBASIC6.14□□□□□ -1.43
ERVFC1P60507 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.14□□□□□ -1.43
ERVFC1P60507 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC6.14□□□□□ -1.43
ERVFC1P60507 AL445222.1-201ENST00000607259 628 ntBASIC6.14□□□□□ -1.43
ERVFC1P60507 PART1_1.1-201ENST00000611761 217 ntBASIC6.14□□□□□ -1.43
ERVFC1P60507 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.14□□□□□ -1.43
ERVFC1P60507 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC6.14□□□□□ -1.43
ERVFC1P60507 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.14□□□□□ -1.43
ERVFC1P60507 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ERVFC1P60507 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
ERVFC1P60507 AL161756.3-201ENST00000641216 2071 ntBASIC6.14□□□□□ -1.43
ERVFC1P60507 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ERVFC1P60507 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ERVFC1P60507 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
ERVFC1P60507 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ERVFC1P60507 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ERVFC1P60507 AL391261.1-201ENST00000555712 1479 ntBASIC6.14□□□□□ -1.43
ERVFC1P60507 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ERVFC1P60507 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ERVFC1P60507 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ERVFC1P60507 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.14□□□□□ -1.43
ERVFC1P60507 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.14□□□□□ -1.43
ERVFC1P60507 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ERVFC1P60507 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.13□□□□□ -1.43
ERVFC1P60507 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
ERVFC1P60507 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
ERVFC1P60507 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
ERVFC1P60507 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ERVFC1P60507 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
ERVFC1P60507 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.13□□□□□ -1.43
ERVFC1P60507 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.13□□□□□ -1.43
ERVFC1P60507 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ERVFC1P60507 AC010132.2-201ENST00000295493 1043 ntBASIC6.13□□□□□ -1.43
ERVFC1P60507 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.13□□□□□ -1.43
ERVFC1P60507 Y_RNA.535-201ENST00000384612 99 ntBASIC6.13□□□□□ -1.43
ERVFC1P60507 AC005042.1-201ENST00000393397 800 ntBASIC6.13□□□□□ -1.43
ERVFC1P60507 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.13□□□□□ -1.43
ERVFC1P60507 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
ERVFC1P60507 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.13□□□□□ -1.43
ERVFC1P60507 RN7SKP285-201ENST00000410137 318 ntBASIC6.13□□□□□ -1.43
ERVFC1P60507 RN7SKP56-201ENST00000410513 331 ntBASIC6.13□□□□□ -1.43
ERVFC1P60507 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC6.13□□□□□ -1.43
ERVFC1P60507 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ERVFC1P60507 RPL21P32-201ENST00000419877 477 ntBASIC6.13□□□□□ -1.43
ERVFC1P60507 RPL34P27-201ENST00000428810 349 ntBASIC6.13□□□□□ -1.43
ERVFC1P60507 TMX2P1-201ENST00000436507 708 ntBASIC6.13□□□□□ -1.43
ERVFC1P60507 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.13□□□□□ -1.43
ERVFC1P60507 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC6.13□□□□□ -1.43
ERVFC1P60507 AL672167.3-201ENST00000465951 960 ntBASIC6.13□□□□□ -1.43
ERVFC1P60507 RPS3AP17-201ENST00000472594 777 ntBASIC6.13□□□□□ -1.43
ERVFC1P60507 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.13□□□□□ -1.43
ERVFC1P60507 AL358832.1-201ENST00000497800 389 ntBASIC6.13□□□□□ -1.43
ERVFC1P60507 MTCYBP18-201ENST00000501056 747 ntBASIC6.13□□□□□ -1.43
ERVFC1P60507 AC105252.1-201ENST00000503089 286 ntBASIC6.13□□□□□ -1.43
ERVFC1P60507 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
ERVFC1P60507 CDC42P3-201ENST00000518493 633 ntBASIC6.13□□□□□ -1.43
ERVFC1P60507 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.13□□□□□ -1.43
ERVFC1P60507 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC6.13□□□□□ -1.43
ERVFC1P60507 OR7K1P-201ENST00000546439 926 ntBASIC6.13□□□□□ -1.43
ERVFC1P60507 HAUS8P1-201ENST00000549005 542 ntBASIC6.13□□□□□ -1.43
ERVFC1P60507 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.13□□□□□ -1.43
ERVFC1P60507 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.13□□□□□ -1.43
ERVFC1P60507 AC096996.1-201ENST00000563813 325 ntBASIC6.13□□□□□ -1.43
ERVFC1P60507 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.13□□□□□ -1.43
ERVFC1P60507 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.13□□□□□ -1.43
ERVFC1P60507 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms