Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RPL21P132-201ENST00000331267 462 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 SNORA51.12-201ENST00000384448 134 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLRN1P58418 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.11□□□□□ -1.59
CLRN1P58418 AL589647.1-201ENST00000402485 466 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 AL139098.1-201ENST00000407291 389 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 AC099535.1-201ENST00000408928 371 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.11□□□□□ -1.59
CLRN1P58418 AL357752.1-201ENST00000412817 349 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 MRPL53P1-201ENST00000414323 319 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.11□□□□□ -1.59
CLRN1P58418 MTND4LP11-201ENST00000422184 280 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.11□□□□□ -1.59
CLRN1P58418 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.11□□□□□ -1.59
CLRN1P58418 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLRN1P58418 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.11□□□□□ -1.59
CLRN1P58418 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.11□□□□□ -1.59
CLRN1P58418 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.11□□□□□ -1.59
CLRN1P58418 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.11□□□□□ -1.59
CLRN1P58418 REG1CP-206ENST00000447469 496 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.11□□□□□ -1.59
CLRN1P58418 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.11□□□□□ -1.59
CLRN1P58418 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.11□□□□□ -1.59
CLRN1P58418 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.11□□□□□ -1.59
CLRN1P58418 RNA5SP269-201ENST00000459032 137 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 RPL30P9-201ENST00000465586 330 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 RN7SL741P-201ENST00000482473 289 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.11□□□□□ -1.59
CLRN1P58418 RPL9P33-201ENST00000484311 566 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 AC012123.2-201ENST00000485809 248 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 RPL37P23-201ENST00000492641 294 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 DUTP1-201ENST00000493631 470 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.11□□□□□ -1.59
CLRN1P58418 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.11□□□□□ -1.59
CLRN1P58418 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.11□□□□□ -1.59
CLRN1P58418 AC114781.3-201ENST00000512083 142 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.11□□□□□ -1.59
CLRN1P58418 RNA5SP473-201ENST00000516402 125 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.11□□□□□ -1.59
CLRN1P58418 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.11□□□□□ -1.59
CLRN1P58418 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.11□□□□□ -1.59
CLRN1P58418 COX6B1P6-201ENST00000522347 255 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 HMGN2P36-201ENST00000529541 409 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.11□□□□□ -1.59
CLRN1P58418 AC024405.1-201ENST00000532521 1042 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 TOMM20P1-201ENST00000534518 427 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.11□□□□□ -1.59
CLRN1P58418 PSMB7P1-201ENST00000556349 514 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.11□□□□□ -1.59
CLRN1P58418 AC090888.3-201ENST00000558917 509 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 ZNF322P1-201ENST00000568013 1209 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 LINC00556-201ENST00000569603 412 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.11□□□□□ -1.59
CLRN1P58418 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.11□□□□□ -1.59
CLRN1P58418 AC020914.6-201ENST00000594327 272 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLRN1P58418 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CLRN1P58418 U6atac.1-201ENST00000616025 117 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 MIR6071-201ENST00000616741 78 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLRN1P58418 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLRN1P58418 CDR1-202ENST00000625883 1485 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLRN1P58418 WDR95P-201ENST00000425638 1542 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLRN1P58418 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CLRN1P58418 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLRN1P58418 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLRN1P58418 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.11□□□□□ -1.59
CLRN1P58418 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
CLRN1P58418 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLRN1P58418 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLRN1P58418 AC083837.1-201ENST00000565297 2994 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.1□□□□□ -1.59
CLRN1P58418 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLRN1P58418 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLRN1P58418 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.1□□□□□ -1.59
CLRN1P58418 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CLRN1P58418 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLRN1P58418 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLRN1P58418 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLRN1P58418 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLRN1P58418 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLRN1P58418 RNU4-91P-201ENST00000364778 135 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CLRN1P58418 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.1□□□□□ -1.59
CLRN1P58418 RNU6-225P-201ENST00000384613 103 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 AC136624.1-201ENST00000400791 413 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CLRN1P58418 Y_RNA.604-201ENST00000410574 102 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 RN7SKP279-201ENST00000411383 298 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 RNU2-6P-201ENST00000411404 190 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 AL136133.1-201ENST00000413694 376 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.1□□□□□ -1.59
CLRN1P58418 AL035660.1-201ENST00000422041 222 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 AC092447.7-201ENST00000422212 1621 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 219.4 ms