Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 RPS17P11-201ENST00000474297 293 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 RPL7AP6-201ENST00000477943 801 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 RN7SL809P-201ENST00000482040 297 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.13□□□□□ -1.59
HDAC4P56524 AC140172.1-201ENST00000502928 141 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 PRELID3BP6-201ENST00000503839 571 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.13□□□□□ -1.59
HDAC4P56524 ENPP7P9-201ENST00000514456 627 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.13□□□□□ -1.59
HDAC4P56524 RNA5SP228-201ENST00000516232 133 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.13□□□□□ -1.59
HDAC4P56524 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.13□□□□□ -1.59
HDAC4P56524 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.13□□□□□ -1.59
HDAC4P56524 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.13□□□□□ -1.59
HDAC4P56524 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.13□□□□□ -1.59
HDAC4P56524 AL049830.4-201ENST00000555149 351 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 NPM1P47-201ENST00000560843 856 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 AC008507.2-201ENST00000588402 1176 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.13□□□□□ -1.59
HDAC4P56524 AL121652.1-201ENST00000608851 448 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 AC008147.4-201ENST00000617570 1204 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 AC010435.1-201ENST00000623353 1177 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.13□□□□□ -1.59
HDAC4P56524 AC024023.1-201ENST00000624530 922 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 AC126544.2-201ENST00000625174 749 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
HDAC4P56524 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HDAC4P56524 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
HDAC4P56524 AC009643.2-201ENST00000603543 1448 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HDAC4P56524 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.13□□□□□ -1.59
HDAC4P56524 SCN1A-220ENST00000641603 12506 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HDAC4P56524 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HDAC4P56524 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.13□□□□□ -1.59
HDAC4P56524 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HDAC4P56524 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HDAC4P56524 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HDAC4P56524 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HDAC4P56524 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HDAC4P56524 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.12□□□□□ -1.59
HDAC4P56524 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HDAC4P56524 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
HDAC4P56524 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HDAC4P56524 SNORD56.4-201ENST00000363883 71 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 AL645733.1-201ENST00000402250 217 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 RPS27AP11-201ENST00000402798 447 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 AP002530.1-201ENST00000405705 684 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 HMGB1P13-201ENST00000406019 642 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 AL512430.2-201ENST00000406786 339 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.12□□□□□ -1.59
HDAC4P56524 TBCAP2-201ENST00000416175 326 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.12□□□□□ -1.59
HDAC4P56524 TCEA1P2-201ENST00000420496 906 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 AC073310.1-201ENST00000423226 1033 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.12□□□□□ -1.59
HDAC4P56524 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.12□□□□□ -1.59
HDAC4P56524 RBMY2QP-201ENST00000429799 1147 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 VDAC1P6-201ENST00000430062 855 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.12□□□□□ -1.59
HDAC4P56524 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.12□□□□□ -1.59
HDAC4P56524 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC5.12□□□□□ -1.59
HDAC4P56524 CEACAMP7-201ENST00000444105 496 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 TRY2P-201ENST00000448860 689 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.12□□□□□ -1.59
HDAC4P56524 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.12□□□□□ -1.59
HDAC4P56524 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.12□□□□□ -1.59
HDAC4P56524 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.12□□□□□ -1.59
HDAC4P56524 METTL15P1-201ENST00000481421 1045 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 RPS27AP16-201ENST00000492222 470 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HDAC4P56524 CEACAMP10-202ENST00000495431 496 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.12□□□□□ -1.59
HDAC4P56524 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.12□□□□□ -1.59
HDAC4P56524 PDCD5P1-201ENST00000543528 309 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.12□□□□□ -1.59
HDAC4P56524 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.12□□□□□ -1.59
HDAC4P56524 AL109741.3-201ENST00000561748 592 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.12□□□□□ -1.59
HDAC4P56524 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.12□□□□□ -1.59
HDAC4P56524 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.12□□□□□ -1.59
HDAC4P56524 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.12□□□□□ -1.59
HDAC4P56524 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.12□□□□□ -1.59
HDAC4P56524 EIF3FP1-201ENST00000613970 806 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 uc_338.9-201ENST00000617424 182 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 AC112694.2-201ENST00000623697 768 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.12□□□□□ -1.59
HDAC4P56524 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.12□□□□□ -1.59
HDAC4P56524 AC008993.2-201ENST00000631744 806 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.12□□□□□ -1.59
HDAC4P56524 MFSD8-213ENST00000641134 1327 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HDAC4P56524 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HDAC4P56524 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HDAC4P56524 HSPD1P14-201ENST00000432666 1618 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 AC026951.1-201ENST00000559530 2459 ntBASIC5.12□□□□□ -1.59
HDAC4P56524 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HDAC4P56524 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms