Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AL356489.2-201ENST00000566968 3528 ntBASIC4.5□□□□□ -1.69
CDH6P55285 AC010300.1-201ENST00000600671 5134 ntBASIC4.5□□□□□ -1.69
CDH6P55285 LINC01109-201ENST00000603837 3081 ntBASIC4.5□□□□□ -1.69
CDH6P55285 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH6P55285 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH6P55285 MIR331-201ENST00000362302 94 ntBASIC4.5□□□□□ -1.69
CDH6P55285 RNA5SP175-201ENST00000364275 119 ntBASIC4.5□□□□□ -1.69
CDH6P55285 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CDH6P55285 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.5□□□□□ -1.69
CDH6P55285 RPS23P10-201ENST00000416185 486 ntBASIC4.5□□□□□ -1.69
CDH6P55285 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH6P55285 PRELID3BP10-201ENST00000431957 584 ntBASIC4.5□□□□□ -1.69
CDH6P55285 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH6P55285 AC011998.1-201ENST00000433403 117 ntBASIC4.5□□□□□ -1.69
CDH6P55285 AL132765.1-201ENST00000434165 553 ntBASIC4.5□□□□□ -1.69
CDH6P55285 MAPRE1P3-201ENST00000435438 796 ntBASIC4.5□□□□□ -1.69
CDH6P55285 RPL7P33-201ENST00000444159 742 ntBASIC4.5□□□□□ -1.69
CDH6P55285 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH6P55285 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH6P55285 AL162388.1-201ENST00000450912 352 ntBASIC4.5□□□□□ -1.69
CDH6P55285 CALM1P2-201ENST00000452941 448 ntBASIC4.5□□□□□ -1.69
CDH6P55285 RPS29P33-201ENST00000456717 146 ntBASIC4.5□□□□□ -1.69
CDH6P55285 AC079804.1-201ENST00000461922 436 ntBASIC4.5□□□□□ -1.69
CDH6P55285 RN7SL738P-201ENST00000470264 297 ntBASIC4.5□□□□□ -1.69
CDH6P55285 AC096741.1-201ENST00000472250 846 ntBASIC4.5□□□□□ -1.69
CDH6P55285 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH6P55285 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH6P55285 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH6P55285 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.5□□□□□ -1.69
CDH6P55285 CR383656.6-201ENST00000550518 394 ntBASIC4.5□□□□□ -1.69
CDH6P55285 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH6P55285 AC027281.1-201ENST00000574178 758 ntBASIC4.5□□□□□ -1.69
CDH6P55285 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CDH6P55285 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.5□□□□□ -1.69
CDH6P55285 MIR4715-201ENST00000584117 79 ntBASIC4.5□□□□□ -1.69
CDH6P55285 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.5□□□□□ -1.69
CDH6P55285 AC138473.1-201ENST00000605717 526 ntBASIC4.5□□□□□ -1.69
CDH6P55285 MIR6820-201ENST00000611508 62 ntBASIC4.5□□□□□ -1.69
CDH6P55285 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH6P55285 AL035461.2-201ENST00000619201 524 ntBASIC4.5□□□□□ -1.69
CDH6P55285 AC007546.1-201ENST00000619452 559 ntBASIC4.5□□□□□ -1.69
CDH6P55285 AC067931.1-201ENST00000624190 671 ntBASIC4.5□□□□□ -1.69
CDH6P55285 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH6P55285 BX005019.1-201ENST00000561881 1810 ntBASIC4.5□□□□□ -1.69
CDH6P55285 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH6P55285 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH6P55285 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH6P55285 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CDH6P55285 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CDH6P55285 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDH6P55285 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CDH6P55285 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
CDH6P55285 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDH6P55285 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDH6P55285 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDH6P55285 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.49□□□□□ -1.69
CDH6P55285 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CDH6P55285 RNU6-984P-201ENST00000363236 109 ntBASIC4.49□□□□□ -1.69
CDH6P55285 RNU6-1251P-201ENST00000364502 107 ntBASIC4.49□□□□□ -1.69
CDH6P55285 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.49□□□□□ -1.69
CDH6P55285 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDH6P55285 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDH6P55285 HSPD1P16-201ENST00000402302 394 ntBASIC4.49□□□□□ -1.69
CDH6P55285 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
CDH6P55285 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.49□□□□□ -1.69
CDH6P55285 RPL26P29-201ENST00000415623 438 ntBASIC4.49□□□□□ -1.69
CDH6P55285 AC004690.1-201ENST00000418216 328 ntBASIC4.49□□□□□ -1.69
CDH6P55285 RPS27AP7-201ENST00000422792 455 ntBASIC4.49□□□□□ -1.69
CDH6P55285 OR6K4P-201ENST00000423179 955 ntBASIC4.49□□□□□ -1.69
CDH6P55285 RPS12P5-201ENST00000423449 371 ntBASIC4.49□□□□□ -1.69
CDH6P55285 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.49□□□□□ -1.69
CDH6P55285 AC093716.1-201ENST00000435923 377 ntBASIC4.49□□□□□ -1.69
CDH6P55285 OR7L1P-201ENST00000456181 380 ntBASIC4.49□□□□□ -1.69
CDH6P55285 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.49□□□□□ -1.69
CDH6P55285 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.49□□□□□ -1.69
CDH6P55285 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.49□□□□□ -1.69
CDH6P55285 PPBPP1-201ENST00000510807 373 ntBASIC4.49□□□□□ -1.69
CDH6P55285 HMGB3P13-201ENST00000511263 607 ntBASIC4.49□□□□□ -1.69
CDH6P55285 NPM1P35-201ENST00000533043 868 ntBASIC4.49□□□□□ -1.69
CDH6P55285 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDH6P55285 AC021483.2-201ENST00000567415 758 ntBASIC4.49□□□□□ -1.69
CDH6P55285 MTND6P33-201ENST00000571794 183 ntBASIC4.49□□□□□ -1.69
CDH6P55285 AC005191.1-201ENST00000603950 358 ntBASIC4.49□□□□□ -1.69
CDH6P55285 AL354984.3-201ENST00000604803 325 ntBASIC4.49□□□□□ -1.69
CDH6P55285 AL353600.1-201ENST00000608148 251 ntBASIC4.49□□□□□ -1.69
CDH6P55285 uc_338.13-201ENST00000618243 179 ntBASIC4.49□□□□□ -1.69
CDH6P55285 AL133370.2-201ENST00000619934 439 ntBASIC4.49□□□□□ -1.69
CDH6P55285 AL669942.2-201ENST00000620352 697 ntBASIC4.49□□□□□ -1.69
CDH6P55285 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.49□□□□□ -1.69
CDH6P55285 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.49□□□□□ -1.69
CDH6P55285 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CDH6P55285 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CDH6P55285 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDH6P55285 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDH6P55285 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CDH6P55285 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH6P55285 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
CDH6P55285 AC090017.1-201ENST00000548612 1779 ntBASIC4.48□□□□□ -1.69
CDH6P55285 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDH6P55285 CASC19-284ENST00000642142 1868 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms