Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
BRCC3P46736 RLIMP2-201ENST00000427891 1563 ntBASIC4.68□□□□□ -1.66
BRCC3P46736 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
BRCC3P46736 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BRCC3P46736 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
BRCC3P46736 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
BRCC3P46736 OR51H2P-202ENST00000641424 3046 ntBASIC4.67□□□□□ -1.66
BRCC3P46736 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.67□□□□□ -1.66
BRCC3P46736 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.67□□□□□ -1.66
BRCC3P46736 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.67□□□□□ -1.66
BRCC3P46736 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.67□□□□□ -1.66
BRCC3P46736 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BRCC3P46736 MIR383-201ENST00000362257 73 ntBASIC4.67□□□□□ -1.66
BRCC3P46736 RN7SKP227-201ENST00000364445 330 ntBASIC4.67□□□□□ -1.66
BRCC3P46736 SNORA70C-201ENST00000384538 135 ntBASIC4.67□□□□□ -1.66
BRCC3P46736 RNU6-1263P-201ENST00000384601 106 ntBASIC4.67□□□□□ -1.66
BRCC3P46736 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.67□□□□□ -1.66
BRCC3P46736 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BRCC3P46736 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.67□□□□□ -1.66
BRCC3P46736 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.67□□□□□ -1.66
BRCC3P46736 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BRCC3P46736 RPS27AP12-201ENST00000429552 465 ntBASIC4.67□□□□□ -1.66
BRCC3P46736 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.67□□□□□ -1.66
BRCC3P46736 TRIM60P13-201ENST00000432350 1283 ntBASIC4.67□□□□□ -1.66
BRCC3P46736 AC092447.2-201ENST00000435487 669 ntBASIC4.67□□□□□ -1.66
BRCC3P46736 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.67□□□□□ -1.66
BRCC3P46736 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.67□□□□□ -1.66
BRCC3P46736 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.67□□□□□ -1.66
BRCC3P46736 RPS26P2-201ENST00000440331 348 ntBASIC4.67□□□□□ -1.66
BRCC3P46736 AL031584.1-201ENST00000447169 754 ntBASIC4.67□□□□□ -1.66
BRCC3P46736 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.67□□□□□ -1.66
BRCC3P46736 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.67□□□□□ -1.66
BRCC3P46736 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.67□□□□□ -1.66
BRCC3P46736 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BRCC3P46736 RN7SL691P-201ENST00000494487 301 ntBASIC4.67□□□□□ -1.66
BRCC3P46736 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.67□□□□□ -1.66
BRCC3P46736 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.67□□□□□ -1.66
BRCC3P46736 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.67□□□□□ -1.66
BRCC3P46736 OR7E10P-201ENST00000526420 991 ntBASIC4.67□□□□□ -1.66
BRCC3P46736 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.67□□□□□ -1.66
BRCC3P46736 AC007224.1-201ENST00000564410 144 ntBASIC4.67□□□□□ -1.66
BRCC3P46736 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.67□□□□□ -1.66
BRCC3P46736 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BRCC3P46736 AC067959.1-201ENST00000604334 379 ntBASIC4.67□□□□□ -1.66
BRCC3P46736 AL021368.1-201ENST00000607490 540 ntBASIC4.67□□□□□ -1.66
BRCC3P46736 AC092653.1-201ENST00000608509 531 ntBASIC4.67□□□□□ -1.66
BRCC3P46736 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.67□□□□□ -1.66
BRCC3P46736 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.67□□□□□ -1.66
BRCC3P46736 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BRCC3P46736 AP000756.2-201ENST00000624168 2567 ntBASIC4.67□□□□□ -1.66
BRCC3P46736 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BRCC3P46736 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
BRCC3P46736 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.67□□□□□ -1.66
BRCC3P46736 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BRCC3P46736 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BRCC3P46736 LINC01355-201ENST00000566551 5444 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BRCC3P46736 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.66□□□□□ -1.66
BRCC3P46736 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
BRCC3P46736 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
BRCC3P46736 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
BRCC3P46736 RNA5SP28-201ENST00000363841 119 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 MIR7-1-201ENST00000384871 110 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 AL161909.1-201ENST00000397390 712 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 MIR921-201ENST00000401133 56 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.66□□□□□ -1.66
BRCC3P46736 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.66□□□□□ -1.66
BRCC3P46736 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.66□□□□□ -1.66
BRCC3P46736 CDY14P-201ENST00000431260 1014 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 RPEP2-201ENST00000432149 701 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 CDY12P-201ENST00000440679 1015 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.66□□□□□ -1.66
BRCC3P46736 CDY13P-201ENST00000445813 1015 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.66□□□□□ -1.66
BRCC3P46736 CDY23P-201ENST00000451661 1014 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 AL513343.1-201ENST00000451818 792 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 TPRKBP1-201ENST00000456243 481 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 AC108751.2-201ENST00000469993 231 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 RPL35P6-201ENST00000490024 372 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 OR9N1P-201ENST00000491296 333 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BRCC3P46736 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.66□□□□□ -1.66
BRCC3P46736 AC008958.1-201ENST00000511047 682 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.66□□□□□ -1.66
BRCC3P46736 HMGB1P19-201ENST00000517578 577 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.66□□□□□ -1.66
BRCC3P46736 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.66□□□□□ -1.66
BRCC3P46736 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.66□□□□□ -1.66
BRCC3P46736 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.66□□□□□ -1.66
BRCC3P46736 AC021483.2-201ENST00000567415 758 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 FAM106CP-201ENST00000582212 507 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 AC023043.4-201ENST00000612081 449 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 AC006840.1-201ENST00000623069 542 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 CFTRP2-201ENST00000634304 199 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.66□□□□□ -1.66
BRCC3P46736 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.66□□□□□ -1.66
BRCC3P46736 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
BRCC3P46736 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
BRCC3P46736 AC006971.1-201ENST00000407916 4486 ntBASIC4.66□□□□□ -1.66
BRCC3P46736 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms