Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC7.03□□□□□ -1.28
VARSP26640 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.03□□□□□ -1.28
VARSP26640 AL078601.3-201ENST00000573303 535 ntBASIC7.03□□□□□ -1.28
VARSP26640 MIR3118-1-201ENST00000581787 76 ntBASIC7.03□□□□□ -1.28
VARSP26640 AC015801.1-201ENST00000585651 153 ntBASIC7.03□□□□□ -1.28
VARSP26640 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC7.03□□□□□ -1.28
VARSP26640 COX6CP16-201ENST00000603667 216 ntBASIC7.03□□□□□ -1.28
VARSP26640 AC121334.2-201ENST00000605387 271 ntBASIC7.03□□□□□ -1.28
VARSP26640 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VARSP26640 AL352984.2-201ENST00000611153 546 ntBASIC7.03□□□□□ -1.28
VARSP26640 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.03□□□□□ -1.28
VARSP26640 CASC19-232ENST00000641480 1244 ntBASIC7.03□□□□□ -1.28
VARSP26640 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
VARSP26640 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VARSP26640 MTND5P10-201ENST00000603719 1809 ntBASIC7.03□□□□□ -1.28
VARSP26640 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VARSP26640 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VARSP26640 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.03□□□□□ -1.28
VARSP26640 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
VARSP26640 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC7.03□□□□□ -1.28
VARSP26640 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.03□□□□□ -1.28
VARSP26640 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.03□□□□□ -1.28
VARSP26640 AC245100.2-201ENST00000454544 1679 ntBASIC7.03□□□□□ -1.28
VARSP26640 ZNF402P-201ENST00000404435 3100 ntBASIC7.03□□□□□ -1.28
VARSP26640 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
VARSP26640 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VARSP26640 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
VARSP26640 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.28
VARSP26640 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.28
VARSP26640 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
VARSP26640 EEF1A1P16-201ENST00000325349 1414 ntBASIC7.02□□□□□ -1.29
VARSP26640 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.02□□□□□ -1.29
VARSP26640 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.02□□□□□ -1.29
VARSP26640 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.02□□□□□ -1.29
VARSP26640 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.02□□□□□ -1.29
VARSP26640 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
VARSP26640 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.02□□□□□ -1.29
VARSP26640 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
VARSP26640 RNU5E-8P-201ENST00000363502 116 ntBASIC7.02□□□□□ -1.29
VARSP26640 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
VARSP26640 SET-203ENST00000372688 801 ntTSL 2 BASIC7.02□□□□□ -1.29
VARSP26640 RNU6-26P-201ENST00000383985 107 ntBASIC7.02□□□□□ -1.29
VARSP26640 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
VARSP26640 RNA5SP35-201ENST00000391257 129 ntBASIC7.02□□□□□ -1.29
VARSP26640 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
VARSP26640 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC7.02□□□□□ -1.29
VARSP26640 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.02□□□□□ -1.29
VARSP26640 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC7.02□□□□□ -1.29
VARSP26640 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VARSP26640 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.02□□□□□ -1.29
VARSP26640 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC7.02□□□□□ -1.29
VARSP26640 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC7.02□□□□□ -1.29
VARSP26640 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.02□□□□□ -1.29
VARSP26640 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.02□□□□□ -1.29
VARSP26640 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC7.02□□□□□ -1.29
VARSP26640 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.02□□□□□ -1.29
VARSP26640 HNRNPDLP3-201ENST00000456745 380 ntBASIC7.02□□□□□ -1.29
VARSP26640 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.02□□□□□ -1.29
VARSP26640 RPL23P10-201ENST00000468780 412 ntBASIC7.02□□□□□ -1.29
VARSP26640 AC091965.3-201ENST00000506236 208 ntBASIC7.02□□□□□ -1.29
VARSP26640 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VARSP26640 AC091885.1-201ENST00000506658 268 ntBASIC7.02□□□□□ -1.29
VARSP26640 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.02□□□□□ -1.29
VARSP26640 AC098591.2-201ENST00000510152 315 ntBASIC7.02□□□□□ -1.29
VARSP26640 RNU4-29P-201ENST00000515943 174 ntBASIC7.02□□□□□ -1.29
VARSP26640 RPL10P18-201ENST00000519384 309 ntBASIC7.02□□□□□ -1.29
VARSP26640 RPL7P20-201ENST00000520308 745 ntBASIC7.02□□□□□ -1.29
VARSP26640 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.02□□□□□ -1.29
VARSP26640 RGS4-209ENST00000531057 544 ntTSL 4 BASIC7.02□□□□□ -1.29
VARSP26640 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC7.02□□□□□ -1.29
VARSP26640 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC7.02□□□□□ -1.29
VARSP26640 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC7.02□□□□□ -1.29
VARSP26640 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.02□□□□□ -1.29
VARSP26640 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.02□□□□□ -1.29
VARSP26640 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.02□□□□□ -1.29
VARSP26640 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC7.02□□□□□ -1.29
VARSP26640 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC7.02□□□□□ -1.29
VARSP26640 MIR1273F-201ENST00000580581 99 ntBASIC7.02□□□□□ -1.29
VARSP26640 AC090312.1-201ENST00000580637 348 ntBASIC7.02□□□□□ -1.29
VARSP26640 SIGLEC31P-201ENST00000594237 551 ntBASIC7.02□□□□□ -1.29
VARSP26640 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC7.02□□□□□ -1.29
VARSP26640 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.02□□□□□ -1.29
VARSP26640 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.02□□□□□ -1.29
VARSP26640 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.02□□□□□ -1.29
VARSP26640 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC7.02□□□□□ -1.29
VARSP26640 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VARSP26640 AL354854.1-201ENST00000455940 1363 ntBASIC7.02□□□□□ -1.29
VARSP26640 CYP2G2P-201ENST00000594920 1485 ntBASIC7.02□□□□□ -1.29
VARSP26640 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.02□□□□□ -1.29
VARSP26640 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
VARSP26640 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
VARSP26640 AC104118.1-201ENST00000607625 1589 ntBASIC7.02□□□□□ -1.29
VARSP26640 AL049780.3-201ENST00000624612 1583 ntBASIC7.02□□□□□ -1.29
VARSP26640 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
VARSP26640 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VARSP26640 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.02□□□□□ -1.29
VARSP26640 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
VARSP26640 PABPC1P8-201ENST00000452851 2086 ntBASIC7.02□□□□□ -1.29
VARSP26640 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VARSP26640 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms