Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.6□□□□□ -1.51
POLR2AP24928 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.6□□□□□ -1.51
POLR2AP24928 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.6□□□□□ -1.51
POLR2AP24928 AC104229.1-201ENST00000561364 255 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 AC004158.1-201ENST00000564508 4319 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
POLR2AP24928 AC022884.2-201ENST00000578535 580 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.6□□□□□ -1.51
POLR2AP24928 AC073342.2-201ENST00000595842 1800 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.6□□□□□ -1.51
POLR2AP24928 AC079880.2-201ENST00000603790 1213 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
POLR2AP24928 AL049794.2-201ENST00000616301 365 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.6□□□□□ -1.51
POLR2AP24928 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
POLR2AP24928 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
POLR2AP24928 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
POLR2AP24928 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
POLR2AP24928 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
POLR2AP24928 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
POLR2AP24928 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
POLR2AP24928 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
POLR2AP24928 AC008033.1-201ENST00000216407 1162 ntBASIC5.59□□□□□ -1.51
POLR2AP24928 RNU5B-4P-201ENST00000363508 111 ntBASIC5.59□□□□□ -1.51
POLR2AP24928 ARL4AP5-201ENST00000404372 599 ntBASIC5.59□□□□□ -1.51
POLR2AP24928 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.59□□□□□ -1.51
POLR2AP24928 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.59□□□□□ -1.51
POLR2AP24928 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.59□□□□□ -1.51
POLR2AP24928 AL160175.1-201ENST00000428124 247 ntBASIC5.59□□□□□ -1.51
POLR2AP24928 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
POLR2AP24928 AL132765.1-201ENST00000434165 553 ntBASIC5.59□□□□□ -1.51
POLR2AP24928 AC004022.1-201ENST00000447766 1066 ntBASIC5.59□□□□□ -1.51
POLR2AP24928 OR52Y1P-201ENST00000452418 828 ntBASIC5.59□□□□□ -1.51
POLR2AP24928 AC104689.1-201ENST00000473356 768 ntBASIC5.59□□□□□ -1.51
POLR2AP24928 AC108475.1-201ENST00000507880 950 ntBASIC5.59□□□□□ -1.51
POLR2AP24928 HMGB1P47-201ENST00000511281 589 ntBASIC5.59□□□□□ -1.51
POLR2AP24928 NPM1P41-201ENST00000512920 831 ntBASIC5.59□□□□□ -1.51
POLR2AP24928 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC5.59□□□□□ -1.51
POLR2AP24928 HMGB1P1-201ENST00000522557 636 ntBASIC5.59□□□□□ -1.51
POLR2AP24928 MTCO1P49-201ENST00000523429 802 ntBASIC5.59□□□□□ -1.51
POLR2AP24928 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.59□□□□□ -1.51
POLR2AP24928 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.59□□□□□ -1.51
POLR2AP24928 MRPS21P9-201ENST00000571150 257 ntBASIC5.59□□□□□ -1.51
POLR2AP24928 AP000919.1-202ENST00000581139 1264 ntBASIC5.59□□□□□ -1.51
POLR2AP24928 AC103987.3-201ENST00000582071 292 ntBASIC5.59□□□□□ -1.51
POLR2AP24928 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.59□□□□□ -1.51
POLR2AP24928 AL357078.3-201ENST00000607528 618 ntBASIC5.59□□□□□ -1.51
POLR2AP24928 AC131159.1-201ENST00000621854 213 ntBASIC5.59□□□□□ -1.51
POLR2AP24928 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.59□□□□□ -1.51
POLR2AP24928 AC103706.2-201ENST00000638080 240 ntBASIC5.59□□□□□ -1.51
POLR2AP24928 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
POLR2AP24928 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
POLR2AP24928 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
POLR2AP24928 AC025031.4-201ENST00000621248 3271 ntBASIC5.59□□□□□ -1.51
POLR2AP24928 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.59□□□□□ -1.51
POLR2AP24928 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.59□□□□□ -1.51
POLR2AP24928 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
POLR2AP24928 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.59□□□□□ -1.52
POLR2AP24928 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
POLR2AP24928 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
POLR2AP24928 Y_RNA.77-201ENST00000362962 107 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 RNU6-623P-201ENST00000363143 105 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 HMGB1P13-201ENST00000406019 642 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 RNA5SP44-201ENST00000410446 133 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 RPL7AP25-201ENST00000423357 805 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
POLR2AP24928 AP001324.1-201ENST00000428553 399 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 MTCO1P45-201ENST00000431457 267 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.58□□□□□ -1.52
POLR2AP24928 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.58□□□□□ -1.52
POLR2AP24928 AC108463.1-201ENST00000450258 347 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 RPL23AP44-201ENST00000482216 473 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.58□□□□□ -1.52
POLR2AP24928 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.58□□□□□ -1.52
POLR2AP24928 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
POLR2AP24928 MTCYBP13-201ENST00000578634 1093 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 AL121932.1-201ENST00000605542 214 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 AC022306.2-201ENST00000617563 647 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
POLR2AP24928 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
POLR2AP24928 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
POLR2AP24928 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
POLR2AP24928 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
POLR2AP24928 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
POLR2AP24928 AL355488.2-201ENST00000609909 2850 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 AC009643.2-201ENST00000603543 1448 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 MTND4P8-201ENST00000514997 1362 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
POLR2AP24928 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
POLR2AP24928 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.58□□□□□ -1.52
POLR2AP24928 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
POLR2AP24928 SNORA70.4-201ENST00000365509 134 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 Z86062.1-201ENST00000406773 777 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 AL445183.3-201ENST00000414168 502 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 COX6CP13-201ENST00000428703 226 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 RPL34P6-201ENST00000432390 345 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 FTH1P16-201ENST00000435241 552 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 AL450023.3-201ENST00000440592 271 ntBASIC5.58□□□□□ -1.52
POLR2AP24928 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms