Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AL158053.1-201ENST00000441503 453 ntBASIC4.7□□□□□ -1.66
CDH3P22223 RNFT1P2-201ENST00000443064 757 ntBASIC4.7□□□□□ -1.66
CDH3P22223 AURKAPS2-201ENST00000454983 333 ntBASIC4.7□□□□□ -1.66
CDH3P22223 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH3P22223 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.7□□□□□ -1.66
CDH3P22223 RNA5SP249-201ENST00000516127 99 ntBASIC4.7□□□□□ -1.66
CDH3P22223 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.7□□□□□ -1.66
CDH3P22223 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH3P22223 AC093510.2-201ENST00000562820 896 ntBASIC4.7□□□□□ -1.66
CDH3P22223 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH3P22223 UBE2FP2-201ENST00000566646 462 ntBASIC4.7□□□□□ -1.66
CDH3P22223 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH3P22223 AC091042.1-201ENST00000579213 173 ntBASIC4.7□□□□□ -1.66
CDH3P22223 MIR4270-201ENST00000581799 70 ntBASIC4.7□□□□□ -1.66
CDH3P22223 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.7□□□□□ -1.66
CDH3P22223 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH3P22223 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH3P22223 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH3P22223 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.7□□□□□ -1.66
CDH3P22223 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH3P22223 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH3P22223 AL512782.1-201ENST00000603093 364 ntBASIC4.7□□□□□ -1.66
CDH3P22223 AC104687.2-201ENST00000604442 342 ntBASIC4.7□□□□□ -1.66
CDH3P22223 AC024933.1-201ENST00000608472 348 ntBASIC4.7□□□□□ -1.66
CDH3P22223 CR381572.2-201ENST00000624852 397 ntBASIC4.7□□□□□ -1.66
CDH3P22223 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH3P22223 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CDH3P22223 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH3P22223 AL136520.1-201ENST00000600311 1322 ntBASIC4.7□□□□□ -1.66
CDH3P22223 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH3P22223 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH3P22223 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH3P22223 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH3P22223 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH3P22223 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH3P22223 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH3P22223 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH3P22223 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH3P22223 RAD1P1-201ENST00000231383 813 ntBASIC4.69□□□□□ -1.66
CDH3P22223 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH3P22223 OR10J6P-201ENST00000289731 930 ntBASIC4.69□□□□□ -1.66
CDH3P22223 RNU6-304P-201ENST00000364855 107 ntBASIC4.69□□□□□ -1.66
CDH3P22223 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH3P22223 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH3P22223 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CDH3P22223 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CDH3P22223 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH3P22223 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH3P22223 AC114755.2-201ENST00000413520 361 ntBASIC4.69□□□□□ -1.66
CDH3P22223 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH3P22223 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH3P22223 MTCO2P1-201ENST00000424648 477 ntBASIC4.69□□□□□ -1.66
CDH3P22223 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH3P22223 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH3P22223 RPL7AP61-201ENST00000443410 636 ntBASIC4.69□□□□□ -1.66
CDH3P22223 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH3P22223 RPS17P2-201ENST00000461663 408 ntBASIC4.69□□□□□ -1.66
CDH3P22223 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH3P22223 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH3P22223 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH3P22223 AP003102.1-201ENST00000525638 661 ntBASIC4.69□□□□□ -1.66
CDH3P22223 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CDH3P22223 MTND5P21-201ENST00000531961 522 ntBASIC4.69□□□□□ -1.66
CDH3P22223 UBTFL9-201ENST00000534504 1148 ntBASIC4.69□□□□□ -1.66
CDH3P22223 AP001880.2-201ENST00000538233 448 ntBASIC4.69□□□□□ -1.66
CDH3P22223 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.69□□□□□ -1.66
CDH3P22223 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH3P22223 AC116553.2-201ENST00000564203 463 ntBASIC4.69□□□□□ -1.66
CDH3P22223 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH3P22223 DNAJC19P3-201ENST00000594491 331 ntBASIC4.69□□□□□ -1.66
CDH3P22223 AF230666.2-201ENST00000602328 725 ntBASIC4.69□□□□□ -1.66
CDH3P22223 AC104785.1-201ENST00000603220 588 ntBASIC4.69□□□□□ -1.66
CDH3P22223 AC084373.1-201ENST00000603311 235 ntBASIC4.69□□□□□ -1.66
CDH3P22223 ABI1P1-201ENST00000603375 1120 ntBASIC4.69□□□□□ -1.66
CDH3P22223 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH3P22223 MIR6820-201ENST00000611508 62 ntBASIC4.69□□□□□ -1.66
CDH3P22223 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH3P22223 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH3P22223 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CDH3P22223 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH3P22223 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH3P22223 ZNF90P1-201ENST00000480493 1951 ntBASIC4.69□□□□□ -1.66
CDH3P22223 AC108751.5-201ENST00000492880 1336 ntBASIC4.69□□□□□ -1.66
CDH3P22223 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH3P22223 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
CDH3P22223 KPNA2P2-201ENST00000419546 1489 ntBASIC4.69□□□□□ -1.66
CDH3P22223 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH3P22223 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH3P22223 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH3P22223 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.68□□□□□ -1.66
CDH3P22223 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH3P22223 AC008758.3-201ENST00000507003 1829 ntBASIC4.68□□□□□ -1.66
CDH3P22223 OR4K17-201ENST00000315543 1032 ntBASIC4.68□□□□□ -1.66
CDH3P22223 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CDH3P22223 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH3P22223 GCNT6-201ENST00000379591 934 ntBASIC4.68□□□□□ -1.66
CDH3P22223 RPL21P108-201ENST00000413857 481 ntBASIC4.68□□□□□ -1.66
CDH3P22223 AC009237.10-201ENST00000414112 510 ntBASIC4.68□□□□□ -1.66
CDH3P22223 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH3P22223 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms