Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
XRCC1P18887 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
XRCC1P18887 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
XRCC1P18887 AC087190.4-201ENST00000574616 8334 ntBASIC4.46□□□□□ -1.69
XRCC1P18887 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
XRCC1P18887 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
XRCC1P18887 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.46□□□□□ -1.7
XRCC1P18887 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
XRCC1P18887 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
XRCC1P18887 RNA5SP52-201ENST00000362448 134 ntBASIC4.46□□□□□ -1.7
XRCC1P18887 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.46□□□□□ -1.7
XRCC1P18887 GSTM3P2-201ENST00000412746 530 ntBASIC4.46□□□□□ -1.7
XRCC1P18887 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.46□□□□□ -1.7
XRCC1P18887 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.46□□□□□ -1.7
XRCC1P18887 AC016712.1-201ENST00000431088 378 ntBASIC4.46□□□□□ -1.7
XRCC1P18887 AC007563.3-201ENST00000433233 371 ntBASIC4.46□□□□□ -1.7
XRCC1P18887 AC093716.1-201ENST00000435923 377 ntBASIC4.46□□□□□ -1.7
XRCC1P18887 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.46□□□□□ -1.7
XRCC1P18887 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.46□□□□□ -1.7
XRCC1P18887 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.46□□□□□ -1.7
XRCC1P18887 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.46□□□□□ -1.7
XRCC1P18887 RPS26P28-201ENST00000470806 348 ntBASIC4.46□□□□□ -1.7
XRCC1P18887 AC012158.1-204ENST00000483430 465 ntBASIC4.46□□□□□ -1.7
XRCC1P18887 AC090013.1-201ENST00000485147 480 ntBASIC4.46□□□□□ -1.7
XRCC1P18887 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.46□□□□□ -1.7
XRCC1P18887 ACTR6P1-201ENST00000514311 1104 ntBASIC4.46□□□□□ -1.7
XRCC1P18887 RNU6-760P-201ENST00000516078 97 ntBASIC4.46□□□□□ -1.7
XRCC1P18887 AC090151.1-201ENST00000520784 730 ntBASIC4.46□□□□□ -1.7
XRCC1P18887 AC018442.3-201ENST00000523025 183 ntBASIC4.46□□□□□ -1.7
XRCC1P18887 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.46□□□□□ -1.7
XRCC1P18887 AC009643.1-201ENST00000532030 391 ntBASIC4.46□□□□□ -1.7
XRCC1P18887 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.46□□□□□ -1.7
XRCC1P18887 DYNLL1P4-201ENST00000549314 266 ntBASIC4.46□□□□□ -1.7
XRCC1P18887 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.46□□□□□ -1.7
XRCC1P18887 CD24P2-201ENST00000565486 219 ntBASIC4.46□□□□□ -1.7
XRCC1P18887 AL356218.2-201ENST00000605264 187 ntBASIC4.46□□□□□ -1.7
XRCC1P18887 AC009237.17-201ENST00000618111 748 ntBASIC4.46□□□□□ -1.7
XRCC1P18887 AL035461.2-201ENST00000619201 524 ntBASIC4.46□□□□□ -1.7
XRCC1P18887 AL139254.3-201ENST00000641097 674 ntBASIC4.46□□□□□ -1.7
XRCC1P18887 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.46□□□□□ -1.7
XRCC1P18887 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
XRCC1P18887 RAD17P1-201ENST00000418130 2042 ntBASIC4.46□□□□□ -1.7
XRCC1P18887 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
XRCC1P18887 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
XRCC1P18887 AC139713.2-214ENST00000642059 1811 ntBASIC4.46□□□□□ -1.7
XRCC1P18887 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
XRCC1P18887 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
XRCC1P18887 AL592182.3-201ENST00000642132 3304 ntBASIC4.45□□□□□ -1.7
XRCC1P18887 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
XRCC1P18887 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
XRCC1P18887 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
XRCC1P18887 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.45□□□□□ -1.7
XRCC1P18887 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.45□□□□□ -1.7
XRCC1P18887 OR6K4P-201ENST00000423179 955 ntBASIC4.45□□□□□ -1.7
XRCC1P18887 NIPA2P1-201ENST00000426223 976 ntBASIC4.45□□□□□ -1.7
XRCC1P18887 RPL21P91-201ENST00000429231 479 ntBASIC4.45□□□□□ -1.7
XRCC1P18887 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
XRCC1P18887 MRPS33P4-201ENST00000434892 317 ntBASIC4.45□□□□□ -1.7
XRCC1P18887 RPL7P33-201ENST00000444159 742 ntBASIC4.45□□□□□ -1.7
XRCC1P18887 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
XRCC1P18887 RPS27AP15-201ENST00000447672 466 ntBASIC4.45□□□□□ -1.7
XRCC1P18887 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.45□□□□□ -1.7
XRCC1P18887 Z95152.1-201ENST00000453556 656 ntBASIC4.45□□□□□ -1.7
XRCC1P18887 AL133244.1-201ENST00000456007 258 ntBASIC4.45□□□□□ -1.7
XRCC1P18887 AC037198.2-201ENST00000478845 733 ntBASIC4.45□□□□□ -1.7
XRCC1P18887 UBA52P3-201ENST00000491303 382 ntBASIC4.45□□□□□ -1.7
XRCC1P18887 AC008694.2-201ENST00000517591 306 ntBASIC4.45□□□□□ -1.7
XRCC1P18887 IGHV3-63-201ENST00000518422 341 ntBASIC4.45□□□□□ -1.7
XRCC1P18887 NPM1P6-201ENST00000521088 871 ntBASIC4.45□□□□□ -1.7
XRCC1P18887 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.45□□□□□ -1.7
XRCC1P18887 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.45□□□□□ -1.7
XRCC1P18887 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.45□□□□□ -1.7
XRCC1P18887 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.45□□□□□ -1.7
XRCC1P18887 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.45□□□□□ -1.7
XRCC1P18887 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.45□□□□□ -1.7
XRCC1P18887 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.45□□□□□ -1.7
XRCC1P18887 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.45□□□□□ -1.7
XRCC1P18887 MIMT1-201ENST00000597105 1050 ntBASIC4.45□□□□□ -1.7
XRCC1P18887 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.45□□□□□ -1.7
XRCC1P18887 BX322635.1-201ENST00000605804 496 ntBASIC4.45□□□□□ -1.7
XRCC1P18887 AC015813.4-201ENST00000610469 179 ntBASIC4.45□□□□□ -1.7
XRCC1P18887 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.45□□□□□ -1.7
XRCC1P18887 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.45□□□□□ -1.7
XRCC1P18887 AP002967.1-201ENST00000624203 539 ntBASIC4.45□□□□□ -1.7
XRCC1P18887 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.45□□□□□ -1.7
XRCC1P18887 AL391684.1-202ENST00000641293 1636 ntBASIC4.45□□□□□ -1.7
XRCC1P18887 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.45□□□□□ -1.7
XRCC1P18887 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
XRCC1P18887 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
XRCC1P18887 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
XRCC1P18887 AC068254.2-201ENST00000623938 3577 ntBASIC4.45□□□□□ -1.7
XRCC1P18887 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.45□□□□□ -1.7
XRCC1P18887 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
XRCC1P18887 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
XRCC1P18887 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
XRCC1P18887 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
XRCC1P18887 RNA5SP447-201ENST00000363749 119 ntBASIC4.44□□□□□ -1.7
XRCC1P18887 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.44□□□□□ -1.7
XRCC1P18887 U3.22-201ENST00000391120 215 ntBASIC4.44□□□□□ -1.7
XRCC1P18887 AL121834.1-202ENST00000404494 277 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms