Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 ACTG1P13-201ENST00000486987 1043 ntBASIC6.74□□□□□ -1.33
LIG1P18858 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6.74□□□□□ -1.33
LIG1P18858 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.74□□□□□ -1.33
LIG1P18858 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC6.74□□□□□ -1.33
LIG1P18858 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC6.74□□□□□ -1.33
LIG1P18858 RPS27AP18-201ENST00000515536 459 ntBASIC6.74□□□□□ -1.33
LIG1P18858 RN7SKP70-201ENST00000516655 271 ntBASIC6.74□□□□□ -1.33
LIG1P18858 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.74□□□□□ -1.33
LIG1P18858 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.74□□□□□ -1.33
LIG1P18858 OR7K1P-201ENST00000546439 926 ntBASIC6.74□□□□□ -1.33
LIG1P18858 AC079905.1-201ENST00000549280 475 ntBASIC6.74□□□□□ -1.33
LIG1P18858 AC092332.1-201ENST00000563684 829 ntBASIC6.74□□□□□ -1.33
LIG1P18858 DPPA2P4-201ENST00000563717 878 ntBASIC6.74□□□□□ -1.33
LIG1P18858 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.74□□□□□ -1.33
LIG1P18858 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.74□□□□□ -1.33
LIG1P18858 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.74□□□□□ -1.33
LIG1P18858 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.74□□□□□ -1.33
LIG1P18858 AL133481.2-203ENST00000607558 139 ntBASIC6.74□□□□□ -1.33
LIG1P18858 AP001437.1-201ENST00000608783 456 ntBASIC6.74□□□□□ -1.33
LIG1P18858 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIG1P18858 AC063943.3-201ENST00000615562 356 ntBASIC6.74□□□□□ -1.33
LIG1P18858 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.74□□□□□ -1.33
LIG1P18858 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
LIG1P18858 AP000473.2-201ENST00000602659 1537 ntBASIC6.74□□□□□ -1.33
LIG1P18858 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIG1P18858 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
LIG1P18858 RBPJP2-201ENST00000618187 1444 ntBASIC6.74□□□□□ -1.33
LIG1P18858 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIG1P18858 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIG1P18858 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIG1P18858 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
LIG1P18858 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
LIG1P18858 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LIG1P18858 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LIG1P18858 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.73□□□□□ -1.33
LIG1P18858 AL355488.2-201ENST00000609909 2850 ntBASIC6.73□□□□□ -1.33
LIG1P18858 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LIG1P18858 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.73□□□□□ -1.33
LIG1P18858 Y_RNA.554-201ENST00000384672 102 ntBASIC6.73□□□□□ -1.33
LIG1P18858 RPL17P50-201ENST00000396131 546 ntBASIC6.73□□□□□ -1.33
LIG1P18858 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
LIG1P18858 NCSTNP1-201ENST00000406229 144 ntBASIC6.73□□□□□ -1.33
LIG1P18858 RNU2-41P-201ENST00000410991 178 ntBASIC6.73□□□□□ -1.33
LIG1P18858 PIGPP2-201ENST00000411569 458 ntBASIC6.73□□□□□ -1.33
LIG1P18858 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC6.73□□□□□ -1.33
LIG1P18858 Z97055.1-201ENST00000419730 712 ntBASIC6.73□□□□□ -1.33
LIG1P18858 AL109913.1-201ENST00000421173 514 ntBASIC6.73□□□□□ -1.33
LIG1P18858 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC6.73□□□□□ -1.33
LIG1P18858 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.73□□□□□ -1.33
LIG1P18858 CDY14P-201ENST00000431260 1014 ntBASIC6.73□□□□□ -1.33
LIG1P18858 MTND1P28-201ENST00000435623 950 ntBASIC6.73□□□□□ -1.33
LIG1P18858 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC6.73□□□□□ -1.33
LIG1P18858 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC6.73□□□□□ -1.33
LIG1P18858 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC6.73□□□□□ -1.33
LIG1P18858 FTLP8-201ENST00000446770 267 ntBASIC6.73□□□□□ -1.33
LIG1P18858 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC6.73□□□□□ -1.33
LIG1P18858 NANOGNBP1-201ENST00000448444 480 ntBASIC6.73□□□□□ -1.33
LIG1P18858 CDY23P-201ENST00000451661 1014 ntBASIC6.73□□□□□ -1.33
LIG1P18858 AC004129.2-201ENST00000457229 287 ntBASIC6.73□□□□□ -1.33
LIG1P18858 MTND1P16-201ENST00000465177 898 ntBASIC6.73□□□□□ -1.33
LIG1P18858 PFN1P6-201ENST00000476786 399 ntBASIC6.73□□□□□ -1.33
LIG1P18858 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC6.73□□□□□ -1.33
LIG1P18858 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.73□□□□□ -1.33
LIG1P18858 RN7SKP298-201ENST00000515950 94 ntBASIC6.73□□□□□ -1.33
LIG1P18858 RNU6-1308P-201ENST00000516817 103 ntBASIC6.73□□□□□ -1.33
LIG1P18858 RNA5SP340-201ENST00000517132 107 ntBASIC6.73□□□□□ -1.33
LIG1P18858 AC087808.1-201ENST00000520501 361 ntBASIC6.73□□□□□ -1.33
LIG1P18858 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.73□□□□□ -1.33
LIG1P18858 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC6.73□□□□□ -1.33
LIG1P18858 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.73□□□□□ -1.33
LIG1P18858 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
LIG1P18858 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.73□□□□□ -1.33
LIG1P18858 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.73□□□□□ -1.33
LIG1P18858 EIF5A2P1-201ENST00000564027 460 ntBASIC6.73□□□□□ -1.33
LIG1P18858 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.73□□□□□ -1.33
LIG1P18858 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.73□□□□□ -1.33
LIG1P18858 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.73□□□□□ -1.33
LIG1P18858 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC6.73□□□□□ -1.33
LIG1P18858 AC008507.3-201ENST00000585753 472 ntBASIC6.73□□□□□ -1.33
LIG1P18858 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC6.73□□□□□ -1.33
LIG1P18858 AC068768.2-201ENST00000602352 343 ntBASIC6.73□□□□□ -1.33
LIG1P18858 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.73□□□□□ -1.33
LIG1P18858 AL138895.2-201ENST00000603019 178 ntBASIC6.73□□□□□ -1.33
LIG1P18858 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.73□□□□□ -1.33
LIG1P18858 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC6.73□□□□□ -1.33
LIG1P18858 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC6.73□□□□□ -1.33
LIG1P18858 AC091304.9-201ENST00000612091 226 ntBASIC6.73□□□□□ -1.33
LIG1P18858 STMN1P1-201ENST00000617809 440 ntBASIC6.73□□□□□ -1.33
LIG1P18858 AC007342.8-201ENST00000623278 678 ntBASIC6.73□□□□□ -1.33
LIG1P18858 NSRP1P1-201ENST00000444067 1693 ntBASIC6.73□□□□□ -1.33
LIG1P18858 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.73□□□□□ -1.33
LIG1P18858 AC109446.4-201ENST00000623235 2755 ntBASIC6.73□□□□□ -1.33
LIG1P18858 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LIG1P18858 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
LIG1P18858 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
LIG1P18858 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
LIG1P18858 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LIG1P18858 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LIG1P18858 MTND5P26-201ENST00000426018 1752 ntBASIC6.72□□□□□ -1.33
LIG1P18858 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms