Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 BX295541.1-201ENST00000417774 250 ntBASIC6.72□□□□□ -1.33
HOXD8P13378 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXD8P13378 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXD8P13378 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXD8P13378 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC6.72□□□□□ -1.33
HOXD8P13378 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXD8P13378 AC064862.4-201ENST00000442180 334 ntBASIC6.72□□□□□ -1.33
HOXD8P13378 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HOXD8P13378 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXD8P13378 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.72□□□□□ -1.33
HOXD8P13378 AC073594.1-201ENST00000462065 364 ntBASIC6.72□□□□□ -1.33
HOXD8P13378 RN7SL177P-201ENST00000476596 299 ntBASIC6.72□□□□□ -1.33
HOXD8P13378 RN7SL717P-201ENST00000478343 297 ntBASIC6.72□□□□□ -1.33
HOXD8P13378 AC091544.1-201ENST00000484702 348 ntBASIC6.72□□□□□ -1.33
HOXD8P13378 AC073610.1-201ENST00000489971 396 ntBASIC6.72□□□□□ -1.33
HOXD8P13378 HMGB1P29-201ENST00000505659 499 ntBASIC6.72□□□□□ -1.33
HOXD8P13378 MTCO3P9-201ENST00000506989 781 ntBASIC6.72□□□□□ -1.33
HOXD8P13378 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXD8P13378 RNA5SP216-201ENST00000516111 123 ntBASIC6.72□□□□□ -1.33
HOXD8P13378 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.72□□□□□ -1.33
HOXD8P13378 OR5AN2P-201ENST00000534535 896 ntBASIC6.72□□□□□ -1.33
HOXD8P13378 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.72□□□□□ -1.33
HOXD8P13378 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.72□□□□□ -1.33
HOXD8P13378 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXD8P13378 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXD8P13378 MIR5697-201ENST00000578045 78 ntBASIC6.72□□□□□ -1.33
HOXD8P13378 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.72□□□□□ -1.33
HOXD8P13378 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.72□□□□□ -1.33
HOXD8P13378 AC020916.2-201ENST00000591242 360 ntBASIC6.72□□□□□ -1.33
HOXD8P13378 AL352984.2-201ENST00000611153 546 ntBASIC6.72□□□□□ -1.33
HOXD8P13378 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXD8P13378 MIR1321-201ENST00000637766 79 ntBASIC6.72□□□□□ -1.33
HOXD8P13378 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.72□□□□□ -1.33
HOXD8P13378 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXD8P13378 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HOXD8P13378 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXD8P13378 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
HOXD8P13378 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HOXD8P13378 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
HOXD8P13378 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HOXD8P13378 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HOXD8P13378 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HOXD8P13378 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HOXD8P13378 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXD8P13378 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXD8P13378 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
HOXD8P13378 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
HOXD8P13378 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.33
HOXD8P13378 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.71□□□□□ -1.33
HOXD8P13378 MTCO1P11-201ENST00000429111 1528 ntBASIC6.71□□□□□ -1.33
HOXD8P13378 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.71□□□□□ -1.33
HOXD8P13378 HSPA8P17-201ENST00000427029 1382 ntBASIC6.71□□□□□ -1.33
HOXD8P13378 ZNF37BP-203ENST00000452306 1352 ntBASIC6.71□□□□□ -1.33
HOXD8P13378 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.71□□□□□ -1.33
HOXD8P13378 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.71□□□□□ -1.33
HOXD8P13378 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.71□□□□□ -1.33
HOXD8P13378 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HOXD8P13378 MT-RNR2-201ENST00000387347 1559 ntBASIC6.71□□□□□ -1.34
HOXD8P13378 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
HOXD8P13378 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HOXD8P13378 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HOXD8P13378 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HOXD8P13378 MIR375-201ENST00000362103 64 ntBASIC6.71□□□□□ -1.34
HOXD8P13378 RNA5SP375-201ENST00000362975 119 ntBASIC6.71□□□□□ -1.34
HOXD8P13378 RNA5SP242-201ENST00000364171 118 ntBASIC6.71□□□□□ -1.34
HOXD8P13378 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HOXD8P13378 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXD8P13378 ZNF90P2-204ENST00000419323 1075 ntBASIC6.71□□□□□ -1.34
HOXD8P13378 AC083875.1-201ENST00000419509 405 ntBASIC6.71□□□□□ -1.34
HOXD8P13378 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXD8P13378 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXD8P13378 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXD8P13378 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC6.71□□□□□ -1.34
HOXD8P13378 NIPA2P5-201ENST00000452282 464 ntBASIC6.71□□□□□ -1.34
HOXD8P13378 AC068522.1-201ENST00000482895 345 ntBASIC6.71□□□□□ -1.34
HOXD8P13378 AC124945.1-201ENST00000485133 188 ntBASIC6.71□□□□□ -1.34
HOXD8P13378 COX6B1P2-201ENST00000489624 230 ntBASIC6.71□□□□□ -1.34
HOXD8P13378 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXD8P13378 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXD8P13378 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXD8P13378 FAM92A1P1-201ENST00000528023 890 ntBASIC6.71□□□□□ -1.34
HOXD8P13378 SLC2A13P1-201ENST00000531560 322 ntBASIC6.71□□□□□ -1.34
HOXD8P13378 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC6.71□□□□□ -1.34
HOXD8P13378 ARL2BPP2-201ENST00000550907 489 ntBASIC6.71□□□□□ -1.34
HOXD8P13378 POLR2KP1-201ENST00000553226 168 ntBASIC6.71□□□□□ -1.34
HOXD8P13378 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.34
HOXD8P13378 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXD8P13378 AC025678.1-201ENST00000567861 338 ntBASIC6.71□□□□□ -1.34
HOXD8P13378 AC010547.6-201ENST00000571789 193 ntBASIC6.71□□□□□ -1.34
HOXD8P13378 RPS3AP23-202ENST00000574601 686 ntBASIC6.71□□□□□ -1.34
HOXD8P13378 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXD8P13378 BNIP3P23-201ENST00000599655 511 ntBASIC6.71□□□□□ -1.34
HOXD8P13378 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXD8P13378 BNIP3P10-201ENST00000605360 577 ntBASIC6.71□□□□□ -1.34
HOXD8P13378 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXD8P13378 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXD8P13378 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXD8P13378 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXD8P13378 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXD8P13378 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms