Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.96□□□□□ -1.78
SGCEO43556 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.96□□□□□ -1.78
SGCEO43556 RPL7AP52-201ENST00000458096 790 ntBASIC3.96□□□□□ -1.78
SGCEO43556 RNU6-1218P-201ENST00000458990 108 ntBASIC3.96□□□□□ -1.78
SGCEO43556 RPL35AP28-201ENST00000459730 331 ntBASIC3.96□□□□□ -1.78
SGCEO43556 AC010326.1-201ENST00000462726 602 ntBASIC3.96□□□□□ -1.78
SGCEO43556 ATP5G1P3-201ENST00000463301 410 ntBASIC3.96□□□□□ -1.78
SGCEO43556 RPL12P20-201ENST00000475538 479 ntBASIC3.96□□□□□ -1.78
SGCEO43556 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.96□□□□□ -1.78
SGCEO43556 AL133372.1-201ENST00000493565 745 ntBASIC3.96□□□□□ -1.78
SGCEO43556 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SGCEO43556 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SGCEO43556 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.96□□□□□ -1.78
SGCEO43556 SMARCE1P4-201ENST00000523647 241 ntBASIC3.96□□□□□ -1.78
SGCEO43556 DEFB109D-201ENST00000529497 240 ntBASIC3.96□□□□□ -1.78
SGCEO43556 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.96□□□□□ -1.78
SGCEO43556 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SGCEO43556 AC092851.1-201ENST00000535964 478 ntBASIC3.96□□□□□ -1.78
SGCEO43556 RFPL1S-203ENST00000539579 330 ntBASIC3.96□□□□□ -1.78
SGCEO43556 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SGCEO43556 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.96□□□□□ -1.78
SGCEO43556 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.96□□□□□ -1.78
SGCEO43556 AC084757.1-201ENST00000559987 490 ntBASIC3.96□□□□□ -1.78
SGCEO43556 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.96□□□□□ -1.78
SGCEO43556 SLC25A36P1-201ENST00000590111 465 ntBASIC3.96□□□□□ -1.78
SGCEO43556 RPL7P50-201ENST00000600588 727 ntBASIC3.96□□□□□ -1.78
SGCEO43556 BPIFA4P-203ENST00000603168 689 ntBASIC3.96□□□□□ -1.78
SGCEO43556 PSMA6P4-201ENST00000603247 718 ntBASIC3.96□□□□□ -1.78
SGCEO43556 AC084373.1-201ENST00000603311 235 ntBASIC3.96□□□□□ -1.78
SGCEO43556 AC103792.1-201ENST00000603591 919 ntBASIC3.96□□□□□ -1.78
SGCEO43556 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.96□□□□□ -1.78
SGCEO43556 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.96□□□□□ -1.78
SGCEO43556 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.96□□□□□ -1.78
SGCEO43556 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SGCEO43556 LINC00622-201ENST00000562811 1570 ntBASIC3.96□□□□□ -1.78
SGCEO43556 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SGCEO43556 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.96□□□□□ -1.78
SGCEO43556 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SGCEO43556 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
SGCEO43556 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.96□□□□□ -1.78
SGCEO43556 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SGCEO43556 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SGCEO43556 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SGCEO43556 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SGCEO43556 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SGCEO43556 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.95□□□□□ -1.78
SGCEO43556 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SGCEO43556 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SGCEO43556 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.95□□□□□ -1.78
SGCEO43556 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SGCEO43556 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SGCEO43556 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.95□□□□□ -1.78
SGCEO43556 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.95□□□□□ -1.78
SGCEO43556 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.95□□□□□ -1.78
SGCEO43556 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SGCEO43556 AL049697.2-201ENST00000403708 294 ntBASIC3.95□□□□□ -1.78
SGCEO43556 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.95□□□□□ -1.78
SGCEO43556 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.95□□□□□ -1.78
SGCEO43556 RCC2P2-201ENST00000422174 918 ntBASIC3.95□□□□□ -1.78
SGCEO43556 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.95□□□□□ -1.78
SGCEO43556 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.95□□□□□ -1.78
SGCEO43556 AL049745.1-201ENST00000433953 286 ntBASIC3.95□□□□□ -1.78
SGCEO43556 AL359265.2-201ENST00000434367 631 ntBASIC3.95□□□□□ -1.78
SGCEO43556 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.95□□□□□ -1.78
SGCEO43556 RPL36AP15-201ENST00000444514 266 ntBASIC3.95□□□□□ -1.78
SGCEO43556 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.95□□□□□ -1.78
SGCEO43556 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.95□□□□□ -1.78
SGCEO43556 AC012671.1-201ENST00000451912 203 ntBASIC3.95□□□□□ -1.78
SGCEO43556 SEPT14P1-201ENST00000458703 648 ntBASIC3.95□□□□□ -1.78
SGCEO43556 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.95□□□□□ -1.78
SGCEO43556 IGLV2-34-201ENST00000490007 283 ntBASIC3.95□□□□□ -1.78
SGCEO43556 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.95□□□□□ -1.78
SGCEO43556 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.95□□□□□ -1.78
SGCEO43556 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.95□□□□□ -1.78
SGCEO43556 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.95□□□□□ -1.78
SGCEO43556 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.95□□□□□ -1.78
SGCEO43556 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.95□□□□□ -1.78
SGCEO43556 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.95□□□□□ -1.78
SGCEO43556 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.95□□□□□ -1.78
SGCEO43556 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.95□□□□□ -1.78
SGCEO43556 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.95□□□□□ -1.78
SGCEO43556 RN7SL690P-201ENST00000582087 240 ntBASIC3.95□□□□□ -1.78
SGCEO43556 BNIP3P32-201ENST00000600015 554 ntBASIC3.95□□□□□ -1.78
SGCEO43556 AC024940.4-201ENST00000605507 246 ntBASIC3.95□□□□□ -1.78
SGCEO43556 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.95□□□□□ -1.78
SGCEO43556 Mico1.1-201ENST00000611698 204 ntBASIC3.95□□□□□ -1.78
SGCEO43556 AL161616.1-201ENST00000611867 286 ntBASIC3.95□□□□□ -1.78
SGCEO43556 AC100827.5-201ENST00000615883 426 ntBASIC3.95□□□□□ -1.78
SGCEO43556 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SGCEO43556 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.95□□□□□ -1.78
SGCEO43556 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
SGCEO43556 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SGCEO43556 CPHL1P-201ENST00000461341 3407 ntBASIC3.95□□□□□ -1.78
SGCEO43556 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SGCEO43556 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SGCEO43556 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.94□□□□□ -1.78
SGCEO43556 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SGCEO43556 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SGCEO43556 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SGCEO43556 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms