Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 OR5AN2P-201ENST00000534535 896 ntBASIC3.54□□□□□ -1.84
SDCBPO00560 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.54□□□□□ -1.84
SDCBPO00560 AC063950.1-201ENST00000552036 308 ntBASIC3.54□□□□□ -1.84
SDCBPO00560 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.54□□□□□ -1.84
SDCBPO00560 AL139041.1-201ENST00000605480 610 ntBASIC3.54□□□□□ -1.84
SDCBPO00560 AC090948.1-201ENST00000607464 549 ntBASIC3.54□□□□□ -1.84
SDCBPO00560 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.54□□□□□ -1.84
SDCBPO00560 AL035461.2-201ENST00000619201 524 ntBASIC3.54□□□□□ -1.84
SDCBPO00560 RMST_9.1-201ENST00000619945 193 ntBASIC3.54□□□□□ -1.84
SDCBPO00560 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.54□□□□□ -1.84
SDCBPO00560 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SDCBPO00560 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SDCBPO00560 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SDCBPO00560 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SDCBPO00560 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.53□□□□□ -1.84
SDCBPO00560 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.53□□□□□ -1.84
SDCBPO00560 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.53□□□□□ -1.84
SDCBPO00560 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SDCBPO00560 HSPD1P11-201ENST00000508643 1702 ntBASIC3.53□□□□□ -1.84
SDCBPO00560 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SDCBPO00560 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.53□□□□□ -1.84
SDCBPO00560 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
SDCBPO00560 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.53□□□□□ -1.84
SDCBPO00560 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SDCBPO00560 AC103591.2-201ENST00000265259 766 ntBASIC3.53□□□□□ -1.84
SDCBPO00560 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
SDCBPO00560 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SDCBPO00560 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SDCBPO00560 MIR192-201ENST00000384915 110 ntBASIC3.53□□□□□ -1.84
SDCBPO00560 CYB5AP4-201ENST00000396692 399 ntBASIC3.53□□□□□ -1.84
SDCBPO00560 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.53□□□□□ -1.84
SDCBPO00560 AC092570.3-201ENST00000420113 693 ntBASIC3.53□□□□□ -1.84
SDCBPO00560 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.53□□□□□ -1.84
SDCBPO00560 MTND2P11-201ENST00000423638 648 ntBASIC3.53□□□□□ -1.84
SDCBPO00560 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.53□□□□□ -1.84
SDCBPO00560 RPL23AP52-201ENST00000439311 478 ntBASIC3.53□□□□□ -1.84
SDCBPO00560 TPTE2P3-201ENST00000441562 1189 ntBASIC3.53□□□□□ -1.84
SDCBPO00560 NDUFA12P1-201ENST00000455914 406 ntBASIC3.53□□□□□ -1.84
SDCBPO00560 RN7SL205P-201ENST00000490174 284 ntBASIC3.53□□□□□ -1.84
SDCBPO00560 RN7SL810P-201ENST00000493031 276 ntBASIC3.53□□□□□ -1.84
SDCBPO00560 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.53□□□□□ -1.84
SDCBPO00560 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.53□□□□□ -1.84
SDCBPO00560 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.53□□□□□ -1.84
SDCBPO00560 AC018442.3-201ENST00000523025 183 ntBASIC3.53□□□□□ -1.84
SDCBPO00560 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.53□□□□□ -1.84
SDCBPO00560 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SDCBPO00560 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.53□□□□□ -1.84
SDCBPO00560 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.53□□□□□ -1.84
SDCBPO00560 AC090515.3-201ENST00000560431 315 ntBASIC3.53□□□□□ -1.84
SDCBPO00560 AC021483.2-201ENST00000567415 758 ntBASIC3.53□□□□□ -1.84
SDCBPO00560 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.53□□□□□ -1.84
SDCBPO00560 AC019193.2-201ENST00000610012 634 ntBASIC3.53□□□□□ -1.84
SDCBPO00560 AL121873.1-201ENST00000616013 524 ntBASIC3.53□□□□□ -1.84
SDCBPO00560 RN7SL722P-201ENST00000617780 284 ntBASIC3.53□□□□□ -1.84
SDCBPO00560 RN7SL565P-201ENST00000618246 284 ntBASIC3.53□□□□□ -1.84
SDCBPO00560 AC009704.2-201ENST00000618739 483 ntBASIC3.53□□□□□ -1.84
SDCBPO00560 AC008013.2-202ENST00000637965 364 ntBASIC3.53□□□□□ -1.84
SDCBPO00560 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SDCBPO00560 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SDCBPO00560 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.53□□□□□ -1.84
SDCBPO00560 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SDCBPO00560 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SDCBPO00560 AC012618.3-205ENST00000637896 1496 ntBASIC3.53□□□□□ -1.84
SDCBPO00560 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.53□□□□□ -1.85
SDCBPO00560 AC012020.1-201ENST00000624541 1728 ntBASIC3.53□□□□□ -1.85
SDCBPO00560 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.85
SDCBPO00560 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.85
SDCBPO00560 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.52□□□□□ -1.85
SDCBPO00560 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SDCBPO00560 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SDCBPO00560 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SDCBPO00560 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SDCBPO00560 RNA5SP513-201ENST00000364648 118 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SDCBPO00560 RPL23AP59-201ENST00000399415 461 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SDCBPO00560 MIR1179-201ENST00000408703 91 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.52□□□□□ -1.85
SDCBPO00560 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.52□□□□□ -1.85
SDCBPO00560 AC013470.3-201ENST00000420252 1194 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 GAPDHP49-201ENST00000421421 961 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 CNOT7P1-201ENST00000429006 852 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 VDAC1P6-201ENST00000430062 855 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 RPSAP41-201ENST00000439695 860 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 AL512326.1-201ENST00000443050 721 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.52□□□□□ -1.85
SDCBPO00560 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.52□□□□□ -1.85
SDCBPO00560 Z95152.1-201ENST00000453556 656 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 RAD23BP3-201ENST00000454157 1152 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 RN7SL98P-201ENST00000462271 300 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 RPS29P19-201ENST00000479709 171 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 AC007686.1-201ENST00000488511 463 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 AGGF1P3-201ENST00000493675 1213 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 BNIP3P41-201ENST00000503774 571 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 IGKV2-38-201ENST00000517443 247 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.52□□□□□ -1.85
SDCBPO00560 AP001804.2-201ENST00000533932 910 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 AC137768.1-201ENST00000549998 553 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms