Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
FOXN3O00409 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.46□□□□□ -1.54
FOXN3O00409 TRGV6-201ENST00000417928 299 ntBASIC5.46□□□□□ -1.54
FOXN3O00409 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.46□□□□□ -1.54
FOXN3O00409 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.46□□□□□ -1.54
FOXN3O00409 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.46□□□□□ -1.54
FOXN3O00409 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.46□□□□□ -1.54
FOXN3O00409 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.46□□□□□ -1.54
FOXN3O00409 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.46□□□□□ -1.54
FOXN3O00409 RPL21P6-201ENST00000479171 504 ntBASIC5.46□□□□□ -1.54
FOXN3O00409 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
FOXN3O00409 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.46□□□□□ -1.54
FOXN3O00409 MTCYBP35-201ENST00000503630 1137 ntBASIC5.46□□□□□ -1.54
FOXN3O00409 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
FOXN3O00409 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.46□□□□□ -1.54
FOXN3O00409 RPL7L1P4-201ENST00000513004 707 ntBASIC5.46□□□□□ -1.54
FOXN3O00409 COX6B1P6-201ENST00000522347 255 ntBASIC5.46□□□□□ -1.54
FOXN3O00409 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.46□□□□□ -1.54
FOXN3O00409 OR11J2P-201ENST00000555298 907 ntBASIC5.46□□□□□ -1.54
FOXN3O00409 AC090888.2-201ENST00000559765 1144 ntBASIC5.46□□□□□ -1.54
FOXN3O00409 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.46□□□□□ -1.54
FOXN3O00409 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.46□□□□□ -1.54
FOXN3O00409 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.46□□□□□ -1.54
FOXN3O00409 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.46□□□□□ -1.54
FOXN3O00409 VN1R83P-201ENST00000595685 445 ntBASIC5.46□□□□□ -1.54
FOXN3O00409 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.46□□□□□ -1.54
FOXN3O00409 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.46□□□□□ -1.54
FOXN3O00409 AL020997.3-201ENST00000602843 359 ntBASIC5.46□□□□□ -1.54
FOXN3O00409 PSMA6P4-201ENST00000603247 718 ntBASIC5.46□□□□□ -1.54
FOXN3O00409 AL035411.2-201ENST00000604022 421 ntBASIC5.46□□□□□ -1.54
FOXN3O00409 AL512329.2-201ENST00000607350 548 ntBASIC5.46□□□□□ -1.54
FOXN3O00409 AP002505.2-201ENST00000623585 696 ntBASIC5.46□□□□□ -1.54
FOXN3O00409 AP000648.2-201ENST00000624182 404 ntBASIC5.46□□□□□ -1.54
FOXN3O00409 AC009039.2-201ENST00000624524 529 ntBASIC5.46□□□□□ -1.54
FOXN3O00409 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.46□□□□□ -1.54
FOXN3O00409 OR2L1P-202ENST00000641567 1023 ntBASIC5.46□□□□□ -1.54
FOXN3O00409 AC073869.10-201ENST00000642016 354 ntBASIC5.46□□□□□ -1.54
FOXN3O00409 LINC02211-204ENST00000642024 1070 ntBASIC5.46□□□□□ -1.54
FOXN3O00409 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.46□□□□□ -1.54
FOXN3O00409 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
FOXN3O00409 AC093535.2-201ENST00000624769 2326 ntBASIC5.46□□□□□ -1.54
FOXN3O00409 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
FOXN3O00409 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
FOXN3O00409 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
FOXN3O00409 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
FOXN3O00409 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
FOXN3O00409 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
FOXN3O00409 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.45□□□□□ -1.54
FOXN3O00409 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.45□□□□□ -1.54
FOXN3O00409 AC021242.1-201ENST00000507315 2035 ntBASIC5.45□□□□□ -1.54
FOXN3O00409 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
FOXN3O00409 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
FOXN3O00409 AC100778.3-201ENST00000580060 1750 ntBASIC5.45□□□□□ -1.54
FOXN3O00409 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
FOXN3O00409 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
FOXN3O00409 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
FOXN3O00409 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.45□□□□□ -1.54
FOXN3O00409 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
FOXN3O00409 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
FOXN3O00409 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
FOXN3O00409 MIR1286-201ENST00000408112 78 ntBASIC5.45□□□□□ -1.54
FOXN3O00409 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
FOXN3O00409 RN7SKP114-201ENST00000410327 279 ntBASIC5.45□□□□□ -1.54
FOXN3O00409 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.45□□□□□ -1.54
FOXN3O00409 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.45□□□□□ -1.54
FOXN3O00409 AC079355.1-201ENST00000421770 223 ntBASIC5.45□□□□□ -1.54
FOXN3O00409 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
FOXN3O00409 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
FOXN3O00409 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.45□□□□□ -1.54
FOXN3O00409 TPMTP4-201ENST00000450749 678 ntBASIC5.45□□□□□ -1.54
FOXN3O00409 OTX2P1-201ENST00000450956 354 ntBASIC5.45□□□□□ -1.54
FOXN3O00409 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.45□□□□□ -1.54
FOXN3O00409 AC092647.2-201ENST00000452998 253 ntBASIC5.45□□□□□ -1.54
FOXN3O00409 MRPL35P4-201ENST00000453682 566 ntBASIC5.45□□□□□ -1.54
FOXN3O00409 USP9YP25-201ENST00000457708 443 ntBASIC5.45□□□□□ -1.54
FOXN3O00409 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.45□□□□□ -1.54
FOXN3O00409 RN7SL441P-201ENST00000492388 296 ntBASIC5.45□□□□□ -1.54
FOXN3O00409 AC091951.3-201ENST00000504093 246 ntBASIC5.45□□□□□ -1.54
FOXN3O00409 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
FOXN3O00409 AC010285.3-201ENST00000511668 676 ntBASIC5.45□□□□□ -1.54
FOXN3O00409 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.45□□□□□ -1.54
FOXN3O00409 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.45□□□□□ -1.54
FOXN3O00409 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.45□□□□□ -1.54
FOXN3O00409 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.45□□□□□ -1.54
FOXN3O00409 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.45□□□□□ -1.54
FOXN3O00409 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.45□□□□□ -1.54
FOXN3O00409 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
FOXN3O00409 MTND4P33-201ENST00000556706 766 ntBASIC5.45□□□□□ -1.54
FOXN3O00409 NDUFB4P11-201ENST00000560510 395 ntBASIC5.45□□□□□ -1.54
FOXN3O00409 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.45□□□□□ -1.54
FOXN3O00409 MIR3176-201ENST00000582210 90 ntBASIC5.45□□□□□ -1.54
FOXN3O00409 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.45□□□□□ -1.54
FOXN3O00409 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.45□□□□□ -1.54
FOXN3O00409 AC097065.2-201ENST00000608159 533 ntBASIC5.45□□□□□ -1.54
FOXN3O00409 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.45□□□□□ -1.54
FOXN3O00409 AL138478.1-201ENST00000612252 832 ntBASIC5.45□□□□□ -1.54
FOXN3O00409 OR1S1-201ENST00000624470 978 ntBASIC5.45□□□□□ -1.54
FOXN3O00409 MIR4302-201ENST00000638058 60 ntBASIC5.45□□□□□ -1.54
FOXN3O00409 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
FOXN3O00409 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms