Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1AO00322 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1AO00322 AC006064.5-201ENST00000541782 248 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 AL109766.1-201ENST00000555080 552 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.02□□□□□ -1.77
UPK1AO00322 AC018552.1-201ENST00000562099 811 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 AC007599.1-201ENST00000568688 1174 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.02□□□□□ -1.77
UPK1AO00322 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.02□□□□□ -1.77
UPK1AO00322 AC005191.1-201ENST00000603950 358 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 AL354950.1-201ENST00000614150 568 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.02□□□□□ -1.77
UPK1AO00322 AC131238.1-201ENST00000617135 328 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 AL035461.2-201ENST00000619201 524 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 AP003499.2-201ENST00000624100 483 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1AO00322 AC140479.6-201ENST00000633535 357 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1AO00322 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1AO00322 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1AO00322 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1AO00322 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
UPK1AO00322 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
UPK1AO00322 EIF2AP4-201ENST00000424793 1781 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1AO00322 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPK1AO00322 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
UPK1AO00322 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
UPK1AO00322 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPK1AO00322 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.01□□□□□ -1.77
UPK1AO00322 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPK1AO00322 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
UPK1AO00322 GCNT6-201ENST00000379591 934 ntBASIC4.01□□□□□ -1.77
UPK1AO00322 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.01□□□□□ -1.77
UPK1AO00322 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.01□□□□□ -1.77
UPK1AO00322 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.01□□□□□ -1.77
UPK1AO00322 AL512326.1-201ENST00000443050 721 ntBASIC4.01□□□□□ -1.77
UPK1AO00322 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.01□□□□□ -1.77
UPK1AO00322 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.01□□□□□ -1.77
UPK1AO00322 RPL23AP24-201ENST00000458203 385 ntBASIC4.01□□□□□ -1.77
UPK1AO00322 AC107015.1-201ENST00000466902 747 ntBASIC4.01□□□□□ -1.77
UPK1AO00322 RN7SL738P-201ENST00000470264 297 ntBASIC4.01□□□□□ -1.77
UPK1AO00322 RPL23AP2-201ENST00000471227 466 ntBASIC4.01□□□□□ -1.77
UPK1AO00322 SYT14P1-201ENST00000481459 721 ntBASIC4.01□□□□□ -1.77
UPK1AO00322 AC013356.1-201ENST00000489027 564 ntBASIC4.01□□□□□ -1.77
UPK1AO00322 AC010374.1-201ENST00000503762 1237 ntBASIC4.01□□□□□ -1.77
UPK1AO00322 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.01□□□□□ -1.77
UPK1AO00322 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.01□□□□□ -1.77
UPK1AO00322 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.01□□□□□ -1.77
UPK1AO00322 NPM1P6-201ENST00000521088 871 ntBASIC4.01□□□□□ -1.77
UPK1AO00322 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.01□□□□□ -1.77
UPK1AO00322 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.01□□□□□ -1.77
UPK1AO00322 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.01□□□□□ -1.77
UPK1AO00322 AC027176.2-201ENST00000559166 746 ntBASIC4.01□□□□□ -1.77
UPK1AO00322 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.01□□□□□ -1.77
UPK1AO00322 MIR4330-201ENST00000579077 105 ntBASIC4.01□□□□□ -1.77
UPK1AO00322 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.01□□□□□ -1.77
UPK1AO00322 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.01□□□□□ -1.77
UPK1AO00322 AC015922.4-201ENST00000612568 690 ntBASIC4.01□□□□□ -1.77
UPK1AO00322 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.01□□□□□ -1.77
UPK1AO00322 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPK1AO00322 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPK1AO00322 AC017007.4-201ENST00000503353 1352 ntBASIC4.01□□□□□ -1.77
UPK1AO00322 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPK1AO00322 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
UPK1AO00322 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4□□□□□ -1.77
UPK1AO00322 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
UPK1AO00322 AC139713.2-214ENST00000642059 1811 ntBASIC4□□□□□ -1.77
UPK1AO00322 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
UPK1AO00322 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
UPK1AO00322 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4□□□□□ -1.77
UPK1AO00322 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
UPK1AO00322 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
UPK1AO00322 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4□□□□□ -1.77
UPK1AO00322 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
UPK1AO00322 RPL37P18-201ENST00000411602 243 ntBASIC4□□□□□ -1.77
UPK1AO00322 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4□□□□□ -1.77
UPK1AO00322 RAB9AP4-201ENST00000415230 609 ntBASIC4□□□□□ -1.77
UPK1AO00322 AL161631.1-201ENST00000417933 486 ntBASIC4□□□□□ -1.77
UPK1AO00322 IPMKP1-201ENST00000425988 855 ntBASIC4□□□□□ -1.77
UPK1AO00322 AL157831.1-201ENST00000426134 473 ntBASIC4□□□□□ -1.77
UPK1AO00322 AL732292.1-201ENST00000426692 226 ntBASIC4□□□□□ -1.77
UPK1AO00322 RPS29P17-201ENST00000430795 166 ntBASIC4□□□□□ -1.77
UPK1AO00322 AC011742.1-201ENST00000431448 434 ntBASIC4□□□□□ -1.77
UPK1AO00322 CEACAMP1-201ENST00000434624 1035 ntBASIC4□□□□□ -1.77
UPK1AO00322 Z95152.1-201ENST00000453556 656 ntBASIC4□□□□□ -1.77
UPK1AO00322 FGF7P3-201ENST00000454645 303 ntBASIC4□□□□□ -1.77
UPK1AO00322 AC133473.1-201ENST00000455173 299 ntBASIC4□□□□□ -1.77
UPK1AO00322 RPL7P32-201ENST00000457119 744 ntBASIC4□□□□□ -1.77
UPK1AO00322 MTND6P32-201ENST00000457611 483 ntBASIC4□□□□□ -1.77
UPK1AO00322 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4□□□□□ -1.77
UPK1AO00322 ALDH7A1P3-201ENST00000492517 345 ntBASIC4□□□□□ -1.77
UPK1AO00322 AC025674.1-201ENST00000507074 324 ntBASIC4□□□□□ -1.77
UPK1AO00322 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4□□□□□ -1.77
UPK1AO00322 CDH12P4-201ENST00000517835 295 ntBASIC4□□□□□ -1.77
UPK1AO00322 CDH12P3-201ENST00000517935 295 ntBASIC4□□□□□ -1.77
UPK1AO00322 CDH12P1-201ENST00000518435 295 ntBASIC4□□□□□ -1.77
UPK1AO00322 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4□□□□□ -1.77
UPK1AO00322 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms