Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ABI1P1-201ENST00000603375 1120 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AC123786.2-201ENST00000603459 275 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AC008745.1-201ENST00000604064 271 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AC104687.2-201ENST00000604442 342 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AL136370.1-201ENST00000608166 691 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 MIR7973-1-201ENST00000614683 76 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 MIR7703-201ENST00000620784 77 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AP000756.2-201ENST00000624168 2567 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AC100778.3-201ENST00000580060 1750 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 VN2R3P-201ENST00000422626 1412 ntBASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 GCNT6-201ENST00000379591 934 ntBASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 HMGB3P18-201ENST00000406327 590 ntBASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AC008173.1-201ENST00000418901 264 ntBASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AC069213.2-201ENST00000420238 366 ntBASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AC099336.2-201ENST00000422457 254 ntBASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 DNAJC19P7-201ENST00000428811 344 ntBASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 MED6P1-201ENST00000439659 713 ntBASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AL356981.1-201ENST00000454879 684 ntBASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AC099560.2-201ENST00000457554 255 ntBASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 RN7SL481P-201ENST00000477764 299 ntBASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 PPM1AP1-201ENST00000502740 1135 ntBASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 IGKV1-32-201ENST00000519290 311 ntBASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AC010200.2-201ENST00000605098 235 ntBASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 FAM27B-201ENST00000610601 213 ntBASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AC012414.7-202ENST00000622705 1090 ntBASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AC103798.2-201ENST00000624292 632 ntBASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AL136520.1-201ENST00000600311 1322 ntBASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 AC096656.1-201ENST00000623826 1364 ntBASIC4.39□□□□□ -1.71
NPIPA3F8WFD2 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 NCLP2-201ENST00000416078 1462 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 METTL21EP-201ENST00000298105 713 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 RNU6-98P-201ENST00000384173 107 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 GLULP6-201ENST00000399502 913 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AL357515.1-201ENST00000402967 542 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AP000357.1-201ENST00000409926 1165 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AC114755.2-201ENST00000413520 361 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 MTND4P11-201ENST00000417020 1058 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 RPL7P29-201ENST00000437151 728 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AC005154.2-201ENST00000438110 379 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 RPL36AP15-201ENST00000444514 266 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 ARL5AP2-201ENST00000444698 533 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 RPL6P5-201ENST00000445678 828 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms