Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.94□□□□□ -1.62
TCRBV7S3A2A0A539 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
TCRBV7S3A2A0A539 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
TCRBV7S3A2A0A539 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TCRBV7S3A2A0A539 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TCRBV7S3A2A0A539 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
TCRBV7S3A2A0A539 DHX9P1-201ENST00000436565 3076 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AC111188.2-201ENST00000529697 1387 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 RNU4-92P-201ENST00000363783 136 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 Y_RNA.472-201ENST00000384322 102 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 RNU6-636P-201ENST00000384598 107 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 MTCO2P31-201ENST00000402702 684 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AP000580.1-201ENST00000404439 358 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 RN7SKP206-201ENST00000410823 293 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AC092745.2-202ENST00000411880 369 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AL445213.1-201ENST00000412589 747 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 LINC01881-201ENST00000416103 412 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 TAF13P2-201ENST00000416876 286 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 SOCS5P3-201ENST00000425115 1576 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AC004938.1-201ENST00000438468 308 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AL137845.2-201ENST00000444292 988 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AC068135.1-201ENST00000446164 246 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AL445433.1-201ENST00000457507 257 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 RNU7-27P-201ENST00000459281 62 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AC108751.2-201ENST00000469993 231 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 RN7SL558P-201ENST00000497468 299 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AC093534.1-201ENST00000504977 132 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AC091860.1-201ENST00000505723 432 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AC106872.4-201ENST00000510050 523 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 MTCO2P15-201ENST00000532655 656 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 CYP2C60P-201ENST00000566088 139 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 TVP23CP2-201ENST00000571473 623 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 MIR3176-201ENST00000582210 90 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AL451049.1-201ENST00000608672 497 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AC093799.2-201ENST00000610062 578 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AC109454.4-201ENST00000623411 649 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AC120349.3-201ENST00000624377 529 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 MUC2-202ENST00000613187 4845 ntBASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
TCRBV7S3A2A0A539 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AC027644.1-201ENST00000419595 298 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AL645608.4-201ENST00000423619 154 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 GTF2IP2-201ENST00000424290 697 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 C1DP1-201ENST00000426049 402 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AP001324.1-201ENST00000428553 399 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AC022022.1-201ENST00000430304 178 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AC112492.1-201ENST00000449607 712 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AL935212.3-201ENST00000450729 284 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 RPS26P39-201ENST00000469206 341 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 RN7SL319P-201ENST00000480656 221 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AC104687.1-201ENST00000485829 412 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AC104108.1-201ENST00000509930 412 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AC004980.4-201ENST00000513375 203 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 Y_RNA.719-201ENST00000517156 106 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AC124293.1-201ENST00000530034 493 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 206.9 ms