Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 AL136164.3-201ENST00000624429 3978 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 SNORA68.2-201ENST00000391263 128 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 RNU6-584P-201ENST00000410350 95 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 RN7SKP106-201ENST00000410832 272 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 AL590139.1-201ENST00000416267 400 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 AL606495.1-201ENST00000422100 813 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 MTND2P2-201ENST00000434633 945 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 TMX2P1-201ENST00000436507 708 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 Z80107.1-201ENST00000436830 412 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 AL450263.2-201ENST00000439400 589 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 RPL12P20-201ENST00000475538 479 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 LARP7P4-201ENST00000481075 878 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 RNA5SP360-201ENST00000516555 118 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 OR5M2P-201ENST00000529003 936 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 AC004923.2-201ENST00000529649 369 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 AP006289.1-201ENST00000538089 277 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 BNIP3P1-201ENST00000547295 580 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 RN7SL652P-201ENST00000577769 300 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 AP004372.1-201ENST00000604842 844 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 AL008729.2-201ENST00000606393 473 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 OR7A19P-201ENST00000608051 733 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 AL353600.1-201ENST00000608148 251 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 MIR6780A-201ENST00000615089 68 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 AC007275.1-201ENST00000621243 671 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 AL022393.1-201ENST00000625142 1677 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 A2MP1-204ENST00000566278 4130 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 AP001273.1-201ENST00000624493 3152 ntBASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SNX9Q9Y5X1 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AL672167.1-204ENST00000641875 3017 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AL590762.2-201ENST00000395798 571 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AL034403.1-201ENST00000399414 885 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 U3.35-201ENST00000408405 208 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AC009302.1-201ENST00000417147 390 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 TMBIM7P-201ENST00000418074 855 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 GLUD1P9-201ENST00000420997 1173 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 EIF4HP2-201ENST00000424380 563 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AC013262.1-201ENST00000426710 252 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 FABP7P2-201ENST00000429946 379 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AC004938.1-201ENST00000438468 308 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AC010326.1-201ENST00000462726 602 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 RN7SL354P-201ENST00000469282 294 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 NIP7P2-201ENST00000485801 544 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AC034244.2-201ENST00000514668 858 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AP003066.2-201ENST00000529375 555 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 RN7SL435P-201ENST00000584418 282 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AC104785.1-201ENST00000603220 588 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AC073137.1-201ENST00000605636 634 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AC063944.3-201ENST00000609969 533 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 MIR6820-201ENST00000611508 62 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 MIR7703-201ENST00000620784 77 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 AC006927.4-201ENST00000639187 543 ntBASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
SNX9Q9Y5X1 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms