Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC074029.1-201ENST00000552531 1044 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AC116553.2-201ENST00000564203 463 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AC093519.1-201ENST00000566109 298 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AC007448.1-201ENST00000582714 234 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AC008536.1-201ENST00000602872 669 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AC069304.3-201ENST00000603938 1084 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AC068313.1-201ENST00000604028 1008 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AC013244.1-201ENST00000604279 193 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AC023158.2-201ENST00000614876 543 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AL355493.4-201ENST00000618530 292 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AC097655.1-201ENST00000635075 318 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AC100757.1-201ENST00000616872 1835 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AL590763.1-201ENST00000398297 1545 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 SNORD116-23-201ENST00000384645 92 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AL121978.1-201ENST00000402778 359 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AL133388.1-201ENST00000404509 287 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 SLC35E1P1-201ENST00000419313 864 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 GSTM5P1-201ENST00000434751 660 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AC093155.1-201ENST00000440164 826 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AL589765.3-201ENST00000446084 462 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 MTCO2P6-201ENST00000463134 685 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 RN7SL30P-201ENST00000488416 306 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 SCARNA20.4-201ENST00000516969 131 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AP001189.2-201ENST00000527320 189 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AP000619.3-201ENST00000535634 1127 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AC004825.1-201ENST00000555068 586 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 MTCYBP27-201ENST00000555160 670 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 SETP1-201ENST00000556014 845 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AC011477.5-201ENST00000586571 259 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AC095055.1-201ENST00000603472 1113 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 ELOCP35-201ENST00000604289 336 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 TUSC7.1-201ENST00000610969 165 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AC092106.3-201ENST00000611308 722 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 AC068620.4-201ENST00000636730 1182 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.02□□□□□ -1.45
COL4A3BPQ9Y5P4 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 AC107081.3-201ENST00000612715 2034 ntBASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms