Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC012671.1-201ENST00000451912 203 ntBASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 AL133244.1-201ENST00000456007 258 ntBASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 AC079804.1-201ENST00000461922 436 ntBASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 RPS29P22-201ENST00000472363 168 ntBASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 AC105918.1-201ENST00000474399 838 ntBASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 AC022336.1-201ENST00000475510 337 ntBASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 AL590410.1-201ENST00000617925 333 ntBASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 AP005019.3-201ENST00000620418 560 ntBASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 DDX18P3-201ENST00000404856 2007 ntBASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 OR56B2P-202ENST00000641377 2453 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 AC017007.4-201ENST00000503353 1352 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 RNA5SP502-201ENST00000362694 119 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 RPL5P19-201ENST00000404228 893 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 JKAMPP1-201ENST00000413804 919 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 AC119751.6-201ENST00000416712 186 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 AC019050.1-201ENST00000418508 492 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 AC092570.3-201ENST00000420113 693 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 UQCRBP1-201ENST00000421129 336 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 NDUFA5P1-201ENST00000433858 341 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 XKRYP6-201ENST00000440468 1116 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 RPL23AP93-201ENST00000440847 484 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 XKRYP3-201ENST00000442113 1116 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 RPL23AP43-201ENST00000446445 471 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 VN1R32P-201ENST00000452234 905 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 RPL10P17-201ENST00000453852 316 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 AC117525.1-201ENST00000515228 503 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 AP001781.1-201ENST00000530977 207 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 AC020915.5-201ENST00000596836 964 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 AC010201.1-201ENST00000605051 540 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 AC100847.1-201ENST00000611316 481 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 AC131238.1-201ENST00000617135 328 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 AL359715.5-201ENST00000623431 443 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 AC073342.3-201ENST00000624211 193 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 AL049536.1-201ENST00000625043 744 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 OR10AB1P-202ENST00000641219 1686 ntBASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
TRAPPC4Q9Y296 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 AL592148.3-201ENST00000608771 2646 ntBASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 MIR365B-201ENST00000362317 111 ntBASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 RNU6-178P-201ENST00000384631 104 ntBASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 MIR192-201ENST00000384915 110 ntBASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 AL607077.1-201ENST00000401718 499 ntBASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 DHFRP5-201ENST00000406944 564 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms