Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 APOOP1-201ENST00000604695 592 ntBASIC8□□□□□ -1.13
HPS5Q9UPZ3 AC004908.1-201ENST00000606572 541 ntBASIC8□□□□□ -1.13
HPS5Q9UPZ3 AL022345.1-201ENST00000607292 135 ntBASIC8□□□□□ -1.13
HPS5Q9UPZ3 AL451049.1-201ENST00000608672 497 ntBASIC8□□□□□ -1.13
HPS5Q9UPZ3 AL008723.3-201ENST00000608926 449 ntBASIC8□□□□□ -1.13
HPS5Q9UPZ3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC8□□□□□ -1.13
HPS5Q9UPZ3 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HPS5Q9UPZ3 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
HPS5Q9UPZ3 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HPS5Q9UPZ3 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC8□□□□□ -1.13
HPS5Q9UPZ3 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC8□□□□□ -1.13
HPS5Q9UPZ3 AC012618.3-205ENST00000637896 1496 ntBASIC8□□□□□ -1.13
HPS5Q9UPZ3 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
HPS5Q9UPZ3 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC8□□□□□ -1.13
HPS5Q9UPZ3 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 AC110597.1-201ENST00000562669 3176 ntBASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 RN7SKP247-201ENST00000411094 308 ntBASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 TMBIM7P-201ENST00000418074 855 ntBASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 AC007559.1-201ENST00000428736 355 ntBASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 PPIAP17-201ENST00000438507 471 ntBASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 RPL23AP28-201ENST00000448062 470 ntBASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 AC104306.1-201ENST00000449702 371 ntBASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 RN7SL552P-201ENST00000462094 276 ntBASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 RN7SL413P-201ENST00000482700 297 ntBASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 RN7SL187P-201ENST00000495587 303 ntBASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 MTCO1P29-201ENST00000496868 288 ntBASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 HMGB1P28-201ENST00000507778 552 ntBASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 AC108043.1-201ENST00000512696 574 ntBASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 Y_RNA.668-201ENST00000516233 93 ntBASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 AC009117.1-201ENST00000563948 554 ntBASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 MIR6768-201ENST00000610734 72 ntBASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 AC083806.3-201ENST00000614016 455 ntBASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 AL096712.1-201ENST00000614561 159 ntBASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 AC009318.4-201ENST00000620496 486 ntBASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.99□□□□□ -1.13
HPS5Q9UPZ3 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 ZNF734P-201ENST00000419494 1534 ntBASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 PPIAP26-201ENST00000377951 522 ntBASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 HSPE1P1-201ENST00000421494 318 ntBASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 AC073335.1-201ENST00000427776 363 ntBASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 AC108479.1-201ENST00000431142 427 ntBASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 AL645939.3-201ENST00000435408 225 ntBASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 AC010307.1-201ENST00000467206 836 ntBASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 TRBV1-201ENST00000476502 284 ntBASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 POU5F1P7-201ENST00000508759 541 ntBASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC7.98□□□□□ -1.13
HPS5Q9UPZ3 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms