Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 TAF9BP2-201ENST00000400856 499 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 Z98745.1-201ENST00000402553 494 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 MTCO2P8-201ENST00000412213 658 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 VN2R3P-201ENST00000422626 1412 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AC245028.1-201ENST00000423259 256 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 MTND1P26-201ENST00000440488 538 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 RRM2P4-201ENST00000441721 562 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 RPS4XP12-201ENST00000461747 709 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AC104164.3-201ENST00000467363 1258 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AC098583.1-201ENST00000480875 255 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AC069304.1-201ENST00000491593 704 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AC096571.1-202ENST00000506634 735 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AC114322.1-201ENST00000506771 926 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 FTH1P11-201ENST00000517577 551 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 MTND2P32-201ENST00000521584 1038 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 HAUS1P3-201ENST00000523909 662 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AC025918.2-201ENST00000558683 763 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 RN7SL435P-201ENST00000584418 282 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AC006363.1-201ENST00000603806 463 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AC013244.3-201ENST00000605614 388 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AC006946.3-201ENST00000609791 756 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AL049536.1-201ENST00000625043 744 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AC013437.2-201ENST00000639587 677 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AL672167.1-205ENST00000641112 3080 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AL355852.1-201ENST00000454081 1771 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AL592148.3-201ENST00000608771 2646 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AC108467.2-201ENST00000617640 1597 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 RAD1P1-201ENST00000231383 813 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 OR56B2P-201ENST00000317102 954 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 SNORA71.2-201ENST00000364941 134 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 MIR129-1-201ENST00000384972 72 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 RNU6-796P-201ENST00000391086 107 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 UQCRBP1-201ENST00000421129 336 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 Z74021.1-201ENST00000423610 407 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 FO393414.1-201ENST00000428697 1184 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AL138787.1-202ENST00000437804 898 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AC006994.1-201ENST00000438212 839 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 SETP6-201ENST00000479329 568 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 OR5H3P-201ENST00000502817 919 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AC021146.7-201ENST00000509604 775 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 RN7SKP92-201ENST00000517266 244 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms