Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 DNAJC19P6-201ENST00000401853 280 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AC006065.1-201ENST00000422539 802 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AC009784.1-201ENST00000426484 460 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AC138761.5-201ENST00000433967 325 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AL592437.1-201ENST00000443781 492 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 MTCYBP42-201ENST00000444653 1130 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 CASP3P1-201ENST00000446037 609 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 PTENP1-201ENST00000447117 1215 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AC079168.1-201ENST00000458741 345 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 RPL23AP44-201ENST00000482216 473 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AC072052.1-201ENST00000496556 306 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 HPRT1P2-201ENST00000505250 544 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 HIGD1AP14-201ENST00000507617 282 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AC118282.2-201ENST00000508739 374 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 Y_RNA.655-201ENST00000515919 96 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 RNU6-1129P-201ENST00000515964 104 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 RNA5SP373-201ENST00000517271 95 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AC023813.2-201ENST00000564321 469 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 NBR2-204ENST00000587322 63 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AC018618.2-201ENST00000604770 446 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AC126915.2-201ENST00000610957 190 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AL603755.1-201ENST00000619504 163 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AP003400.3-201ENST00000624904 346 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 OR8B1P-202ENST00000641132 1178 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 LINC02211-204ENST00000642024 1070 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AP001642.1-201ENST00000624727 2117 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AL034370.1-201ENST00000397254 1590 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AC104964.3-201ENST00000606115 2860 ntBASIC5.37□□□□□ -1.55
DKK3Q9UBP4 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 SNORD65C-201ENST00000390962 71 ntBASIC5.37□□□□□ -1.55
DKK3Q9UBP4 HSPA8P15-201ENST00000401676 786 ntBASIC5.37□□□□□ -1.55
DKK3Q9UBP4 CTSL3P-202ENST00000412179 788 ntBASIC5.37□□□□□ -1.55
DKK3Q9UBP4 HMGB3P31-201ENST00000413333 595 ntBASIC5.37□□□□□ -1.55
DKK3Q9UBP4 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 AC093084.1-201ENST00000424233 687 ntBASIC5.37□□□□□ -1.55
DKK3Q9UBP4 GTF2IP2-201ENST00000424290 697 ntBASIC5.37□□□□□ -1.55
DKK3Q9UBP4 AL139148.1-201ENST00000427122 680 ntBASIC5.37□□□□□ -1.55
DKK3Q9UBP4 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 FHP1-201ENST00000442741 703 ntBASIC5.37□□□□□ -1.55
DKK3Q9UBP4 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 AC113430.1-201ENST00000506872 718 ntBASIC5.37□□□□□ -1.55
DKK3Q9UBP4 AC008565.1-201ENST00000509046 885 ntBASIC5.37□□□□□ -1.55
DKK3Q9UBP4 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 RNA5SP92-201ENST00000516437 110 ntBASIC5.37□□□□□ -1.55
DKK3Q9UBP4 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 AC010306.1-201ENST00000523223 1117 ntBASIC5.37□□□□□ -1.55
DKK3Q9UBP4 AP003033.1-201ENST00000527244 415 ntBASIC5.37□□□□□ -1.55
DKK3Q9UBP4 MTND2P26-201ENST00000528255 1029 ntBASIC5.37□□□□□ -1.55
DKK3Q9UBP4 AC022882.1-201ENST00000532142 501 ntBASIC5.37□□□□□ -1.55
DKK3Q9UBP4 OR8G3P-201ENST00000533406 921 ntBASIC5.37□□□□□ -1.55
DKK3Q9UBP4 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.37□□□□□ -1.55
DKK3Q9UBP4 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms