Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC093720.1-201ENST00000505681 714 ntBASIC4.29□□□□□ -1.72
TREX1Q9NSU2 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.29□□□□□ -1.72
TREX1Q9NSU2 AC022616.2-201ENST00000523185 300 ntBASIC4.29□□□□□ -1.72
TREX1Q9NSU2 TRAV8-5-201ENST00000537369 341 ntBASIC4.29□□□□□ -1.72
TREX1Q9NSU2 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
TREX1Q9NSU2 AC011270.1-201ENST00000558606 583 ntBASIC4.29□□□□□ -1.72
TREX1Q9NSU2 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.29□□□□□ -1.72
TREX1Q9NSU2 AC234771.5-201ENST00000600161 514 ntBASIC4.29□□□□□ -1.72
TREX1Q9NSU2 AC079298.2-201ENST00000623885 459 ntBASIC4.29□□□□□ -1.72
TREX1Q9NSU2 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
TREX1Q9NSU2 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.29□□□□□ -1.72
TREX1Q9NSU2 AC025031.4-201ENST00000621248 3271 ntBASIC4.29□□□□□ -1.72
TREX1Q9NSU2 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.29□□□□□ -1.72
TREX1Q9NSU2 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 RNA5SP52-201ENST00000362448 134 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 MIR708-201ENST00000390708 88 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 ELOCP19-201ENST00000411919 318 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 RAB9AP4-201ENST00000415230 609 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 AC096644.3-201ENST00000416788 338 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 CYCSP10-201ENST00000417973 294 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 CEACAMP1-201ENST00000434624 1035 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 AL512326.1-201ENST00000443050 721 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 PHBP16-201ENST00000446318 950 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 RPL23AP81-201ENST00000455252 467 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 RPL5P16-201ENST00000471467 790 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 RN7SL810P-201ENST00000493031 276 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 RN7SL691P-201ENST00000494487 301 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 RNA5SP73-201ENST00000516744 108 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 AC010476.1-201ENST00000519111 851 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 IFITM8P-201ENST00000522529 394 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 AC027176.2-201ENST00000559166 746 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 AC090515.3-201ENST00000560431 315 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 AC064801.1-201ENST00000612025 407 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 AL035461.2-201ENST00000619201 524 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 AL445363.3-201ENST00000623080 671 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 AC067931.1-201ENST00000624190 671 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 OR10AB1P-202ENST00000641219 1686 ntBASIC4.28□□□□□ -1.72
TREX1Q9NSU2 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TREX1Q9NSU2 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TREX1Q9NSU2 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TREX1Q9NSU2 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.27□□□□□ -1.73
TREX1Q9NSU2 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.27□□□□□ -1.73
TREX1Q9NSU2 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.27□□□□□ -1.73
TREX1Q9NSU2 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.27□□□□□ -1.73
TREX1Q9NSU2 MTND2P28-201ENST00000457540 1044 ntBASIC4.27□□□□□ -1.73
TREX1Q9NSU2 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.27□□□□□ -1.73
TREX1Q9NSU2 AC007686.1-201ENST00000488511 463 ntBASIC4.27□□□□□ -1.73
TREX1Q9NSU2 AC025674.1-201ENST00000507074 324 ntBASIC4.27□□□□□ -1.73
TREX1Q9NSU2 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.27□□□□□ -1.73
TREX1Q9NSU2 RNU4-18P-201ENST00000516751 149 ntBASIC4.27□□□□□ -1.73
TREX1Q9NSU2 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.27□□□□□ -1.73
TREX1Q9NSU2 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TREX1Q9NSU2 AC109635.6-201ENST00000525487 1113 ntBASIC4.27□□□□□ -1.73
TREX1Q9NSU2 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.27□□□□□ -1.73
TREX1Q9NSU2 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.27□□□□□ -1.73
TREX1Q9NSU2 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.27□□□□□ -1.73
TREX1Q9NSU2 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.27□□□□□ -1.73
TREX1Q9NSU2 MIR4443-201ENST00000585052 53 ntBASIC4.27□□□□□ -1.73
TREX1Q9NSU2 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.27□□□□□ -1.73
TREX1Q9NSU2 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.27□□□□□ -1.73
TREX1Q9NSU2 AC005191.1-201ENST00000603950 358 ntBASIC4.27□□□□□ -1.73
TREX1Q9NSU2 AC019193.2-201ENST00000610012 634 ntBASIC4.27□□□□□ -1.73
TREX1Q9NSU2 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.27□□□□□ -1.73
TREX1Q9NSU2 AP000346.3-201ENST00000622821 210 ntBASIC4.27□□□□□ -1.73
TREX1Q9NSU2 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.27□□□□□ -1.73
TREX1Q9NSU2 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
TREX1Q9NSU2 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.27□□□□□ -1.73
TREX1Q9NSU2 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TREX1Q9NSU2 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
TREX1Q9NSU2 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.26□□□□□ -1.73
TREX1Q9NSU2 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
TREX1Q9NSU2 AC010329.2-201ENST00000595195 2737 ntBASIC4.26□□□□□ -1.73
TREX1Q9NSU2 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.26□□□□□ -1.73
TREX1Q9NSU2 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms