Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AC105227.2-201ENST00000615075 605 ntBASIC5.12□□□□□ -1.59
NECTIN3Q9NQS3 AC234782.5-201ENST00000617723 324 ntBASIC5.12□□□□□ -1.59
NECTIN3Q9NQS3 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NECTIN3Q9NQS3 AC022509.4-201ENST00000621404 572 ntBASIC5.12□□□□□ -1.59
NECTIN3Q9NQS3 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.12□□□□□ -1.59
NECTIN3Q9NQS3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NECTIN3Q9NQS3 DCAF13P3-201ENST00000561147 1334 ntBASIC5.12□□□□□ -1.59
NECTIN3Q9NQS3 AL078621.3-201ENST00000623707 2042 ntBASIC5.12□□□□□ -1.59
NECTIN3Q9NQS3 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NECTIN3Q9NQS3 AC112198.2-201ENST00000426589 6996 ntBASIC5.12□□□□□ -1.59
NECTIN3Q9NQS3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NECTIN3Q9NQS3 Z99496.1-201ENST00000469424 1477 ntBASIC5.12□□□□□ -1.59
NECTIN3Q9NQS3 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.12□□□□□ -1.59
NECTIN3Q9NQS3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NECTIN3Q9NQS3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.12□□□□□ -1.59
NECTIN3Q9NQS3 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.12□□□□□ -1.59
NECTIN3Q9NQS3 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NECTIN3Q9NQS3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.12□□□□□ -1.59
NECTIN3Q9NQS3 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NECTIN3Q9NQS3 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NECTIN3Q9NQS3 AC090017.1-201ENST00000548612 1779 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 CASC19-204ENST00000641001 2055 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AL512646.1-201ENST00000269395 1077 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 MIR133B-201ENST00000362210 119 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 RNA5SP335-201ENST00000363817 110 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 Y_RNA.465-201ENST00000384293 102 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AL133388.1-201ENST00000404509 287 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 RNU6-603P-201ENST00000411403 107 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AL450992.3-201ENST00000413192 568 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 RPL35AP24-201ENST00000413846 330 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 ELOCP9-201ENST00000418624 239 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 RPL7AP49-201ENST00000429522 581 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AL591438.1-201ENST00000433508 581 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 CYCSP6-201ENST00000434498 302 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AC016772.1-201ENST00000444170 1261 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AC011225.1-201ENST00000457751 369 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AC245028.2-201ENST00000458673 253 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AC011979.1-201ENST00000472300 483 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 RN7SL809P-201ENST00000482040 297 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AC021106.1-201ENST00000509020 1058 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AC008885.2-201ENST00000509506 930 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AC048346.1-201ENST00000510247 144 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 BX510359.5-201ENST00000515651 304 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 SCARNA16.4-201ENST00000516956 187 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 MRPS36P3-201ENST00000519284 130 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AC007225.2-201ENST00000562529 256 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AC022662.1-201ENST00000580252 331 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 FKBP1AP1-201ENST00000594588 318 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AP000769.2-201ENST00000602344 396 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 MRPS35P3-201ENST00000603189 709 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AL512624.1-201ENST00000613638 469 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AC000374.1-201ENST00000434698 1745 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AL731566.1-201ENST00000620490 1937 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AC009229.4-201ENST00000623854 1947 ntBASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NECTIN3Q9NQS3 AL353796.1-201ENST00000561542 3241 ntBASIC5.1□□□□□ -1.59
NECTIN3Q9NQS3 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
NECTIN3Q9NQS3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NECTIN3Q9NQS3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.1□□□□□ -1.59
NECTIN3Q9NQS3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NECTIN3Q9NQS3 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms