Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 H2AFZP6-201ENST00000444403 394 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.93□□□□□ -1.46
VTA1Q9NP79 MTND1P29-201ENST00000448112 647 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.93□□□□□ -1.46
VTA1Q9NP79 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
VTA1Q9NP79 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VTA1Q9NP79 RPL23AP12-201ENST00000467573 473 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 AC083982.1-201ENST00000485679 344 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 AL035404.1-201ENST00000497982 568 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.93□□□□□ -1.46
VTA1Q9NP79 AC021193.1-201ENST00000511607 420 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 AC093755.1-201ENST00000512950 1023 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 SEPT10P1-201ENST00000517342 1162 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.93□□□□□ -1.46
VTA1Q9NP79 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VTA1Q9NP79 AL442163.2-201ENST00000553912 710 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 AL358913.1-201ENST00000554342 121 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.93□□□□□ -1.46
VTA1Q9NP79 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.93□□□□□ -1.46
VTA1Q9NP79 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VTA1Q9NP79 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.93□□□□□ -1.46
VTA1Q9NP79 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VTA1Q9NP79 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.93□□□□□ -1.46
VTA1Q9NP79 AL139124.1-201ENST00000609123 421 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 AC015712.7-201ENST00000615211 635 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 AC009318.3-201ENST00000616916 503 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 AL158163.2-201ENST00000619110 700 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 AC091953.3-201ENST00000623220 236 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.93□□□□□ -1.46
VTA1Q9NP79 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VTA1Q9NP79 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VTA1Q9NP79 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.93□□□□□ -1.46
VTA1Q9NP79 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
VTA1Q9NP79 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.93□□□□□ -1.46
VTA1Q9NP79 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
VTA1Q9NP79 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VTA1Q9NP79 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 DDX18P5-201ENST00000534547 1306 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
VTA1Q9NP79 AP005901.5-201ENST00000545779 1796 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
VTA1Q9NP79 AC104964.3-201ENST00000606115 2860 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VTA1Q9NP79 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
VTA1Q9NP79 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VTA1Q9NP79 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 U3.10-201ENST00000364459 214 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 RNU6-317P-201ENST00000384031 107 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 PPIAP9-201ENST00000403866 498 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 MIR1303-201ENST00000408625 86 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 RAP1BP1-201ENST00000412709 553 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 AL354868.1-201ENST00000417077 482 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 AC007435.1-201ENST00000421086 415 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 AL009174.1-201ENST00000426577 416 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 AC104837.2-201ENST00000427236 424 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 AL590399.2-201ENST00000427536 309 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VTA1Q9NP79 UBE2V1P1-201ENST00000430836 445 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 Z80107.2-201ENST00000445127 392 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 MTCO2P25-201ENST00000447065 681 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VTA1Q9NP79 RN7SKP260-201ENST00000516907 149 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 NIFKP8-201ENST00000560500 874 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 AL390726.5-202ENST00000564800 256 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 BPTFP1-201ENST00000579209 492 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 AL109653.1-201ENST00000603091 248 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 AL158042.1-201ENST00000605338 460 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 AP003392.5-201ENST00000607857 415 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 AC107075.1-201ENST00000613695 314 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 AC009090.3-201ENST00000616553 565 ntBASIC5.92□□□□□ -1.46
VTA1Q9NP79 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
VTA1Q9NP79 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VTA1Q9NP79 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VTA1Q9NP79 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.92□□□□□ -1.46
VTA1Q9NP79 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VTA1Q9NP79 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms