Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.67□□□□□ -1.66
NXF3Q9H4D5 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
NXF3Q9H4D5 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NXF3Q9H4D5 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NXF3Q9H4D5 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NXF3Q9H4D5 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.66□□□□□ -1.66
NXF3Q9H4D5 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NXF3Q9H4D5 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NXF3Q9H4D5 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
NXF3Q9H4D5 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
NXF3Q9H4D5 RNU1-94P-201ENST00000362627 173 ntBASIC4.66□□□□□ -1.66
NXF3Q9H4D5 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NXF3Q9H4D5 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NXF3Q9H4D5 AL672167.2-201ENST00000377164 879 ntBASIC4.66□□□□□ -1.66
NXF3Q9H4D5 RNU1-44P-201ENST00000384453 163 ntBASIC4.66□□□□□ -1.66
NXF3Q9H4D5 RNU1-13P-201ENST00000384499 162 ntBASIC4.66□□□□□ -1.66
NXF3Q9H4D5 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.66□□□□□ -1.66
NXF3Q9H4D5 AL589994.1-201ENST00000404962 340 ntBASIC4.66□□□□□ -1.66
NXF3Q9H4D5 MIR1911-201ENST00000410783 80 ntBASIC4.66□□□□□ -1.66
NXF3Q9H4D5 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.66□□□□□ -1.66
NXF3Q9H4D5 AC013470.3-201ENST00000420252 1194 ntBASIC4.66□□□□□ -1.66
NXF3Q9H4D5 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.66□□□□□ -1.66
NXF3Q9H4D5 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.66□□□□□ -1.66
NXF3Q9H4D5 SEPT14P1-201ENST00000458703 648 ntBASIC4.66□□□□□ -1.66
NXF3Q9H4D5 RPS20P4-201ENST00000461659 355 ntBASIC4.66□□□□□ -1.66
NXF3Q9H4D5 AC016687.1-201ENST00000482574 353 ntBASIC4.66□□□□□ -1.66
NXF3Q9H4D5 AC090013.1-201ENST00000485147 480 ntBASIC4.66□□□□□ -1.66
NXF3Q9H4D5 AGGF1P3-201ENST00000493675 1213 ntBASIC4.66□□□□□ -1.66
NXF3Q9H4D5 RPS27AP13-201ENST00000498403 237 ntBASIC4.66□□□□□ -1.66
NXF3Q9H4D5 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.66□□□□□ -1.66
NXF3Q9H4D5 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.66□□□□□ -1.66
NXF3Q9H4D5 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.66□□□□□ -1.66
NXF3Q9H4D5 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.66□□□□□ -1.66
NXF3Q9H4D5 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.66□□□□□ -1.66
NXF3Q9H4D5 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.66□□□□□ -1.66
NXF3Q9H4D5 RN7SL600P-201ENST00000581811 299 ntBASIC4.66□□□□□ -1.66
NXF3Q9H4D5 AC005034.4-201ENST00000603612 899 ntBASIC4.66□□□□□ -1.66
NXF3Q9H4D5 AC096553.1-201ENST00000605169 829 ntBASIC4.66□□□□□ -1.66
NXF3Q9H4D5 FAM27D1-201ENST00000612308 341 ntBASIC4.66□□□□□ -1.66
NXF3Q9H4D5 AP003499.2-201ENST00000624100 483 ntBASIC4.66□□□□□ -1.66
NXF3Q9H4D5 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.66□□□□□ -1.66
NXF3Q9H4D5 MIR492-201ENST00000638676 116 ntBASIC4.66□□□□□ -1.66
NXF3Q9H4D5 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NXF3Q9H4D5 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NXF3Q9H4D5 AC091046.3-201ENST00000631455 1574 ntBASIC4.65□□□□□ -1.66
NXF3Q9H4D5 MAPK10-303ENST00000641324 3959 ntBASIC4.65□□□□□ -1.66
NXF3Q9H4D5 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
NXF3Q9H4D5 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
NXF3Q9H4D5 SNORA68.2-201ENST00000391263 128 ntBASIC4.65□□□□□ -1.67
NXF3Q9H4D5 COX6CP15-201ENST00000426313 211 ntBASIC4.65□□□□□ -1.67
NXF3Q9H4D5 COX6B1P7-201ENST00000430845 235 ntBASIC4.65□□□□□ -1.67
NXF3Q9H4D5 PPIAP13-201ENST00000434706 478 ntBASIC4.65□□□□□ -1.67
NXF3Q9H4D5 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.65□□□□□ -1.67
NXF3Q9H4D5 EEF1A1P1-201ENST00000447052 739 ntBASIC4.65□□□□□ -1.67
NXF3Q9H4D5 RPS7P7-201ENST00000463499 571 ntBASIC4.65□□□□□ -1.67
NXF3Q9H4D5 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.65□□□□□ -1.67
NXF3Q9H4D5 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
NXF3Q9H4D5 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.65□□□□□ -1.67
NXF3Q9H4D5 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.65□□□□□ -1.67
NXF3Q9H4D5 AL592156.1-201ENST00000508758 304 ntBASIC4.65□□□□□ -1.67
NXF3Q9H4D5 AC026402.1-201ENST00000513642 170 ntBASIC4.65□□□□□ -1.67
NXF3Q9H4D5 RN7SKP34-201ENST00000516142 244 ntBASIC4.65□□□□□ -1.67
NXF3Q9H4D5 AC018442.3-201ENST00000523025 183 ntBASIC4.65□□□□□ -1.67
NXF3Q9H4D5 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.65□□□□□ -1.67
NXF3Q9H4D5 AC084824.1-201ENST00000550917 1005 ntBASIC4.65□□□□□ -1.67
NXF3Q9H4D5 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.65□□□□□ -1.67
NXF3Q9H4D5 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.65□□□□□ -1.67
NXF3Q9H4D5 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.65□□□□□ -1.67
NXF3Q9H4D5 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.65□□□□□ -1.67
NXF3Q9H4D5 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.65□□□□□ -1.67
NXF3Q9H4D5 VN1R81P-201ENST00000602085 372 ntBASIC4.65□□□□□ -1.67
NXF3Q9H4D5 SNORD91B-202ENST00000608459 222 ntBASIC4.65□□□□□ -1.67
NXF3Q9H4D5 AC090506.2-201ENST00000624521 419 ntBASIC4.65□□□□□ -1.67
NXF3Q9H4D5 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.65□□□□□ -1.67
NXF3Q9H4D5 AC008013.2-202ENST00000637965 364 ntBASIC4.65□□□□□ -1.67
NXF3Q9H4D5 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.65□□□□□ -1.67
NXF3Q9H4D5 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.65□□□□□ -1.67
NXF3Q9H4D5 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.65□□□□□ -1.67
NXF3Q9H4D5 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NXF3Q9H4D5 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NXF3Q9H4D5 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.64□□□□□ -1.67
NXF3Q9H4D5 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
NXF3Q9H4D5 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.64□□□□□ -1.67
NXF3Q9H4D5 ATP5F1P2-201ENST00000398143 760 ntBASIC4.64□□□□□ -1.67
NXF3Q9H4D5 RN7SKP263-201ENST00000411194 309 ntBASIC4.64□□□□□ -1.67
NXF3Q9H4D5 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.64□□□□□ -1.67
NXF3Q9H4D5 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.64□□□□□ -1.67
NXF3Q9H4D5 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.64□□□□□ -1.67
NXF3Q9H4D5 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NXF3Q9H4D5 TRGV7-201ENST00000427089 353 ntBASIC4.64□□□□□ -1.67
NXF3Q9H4D5 AL132765.1-201ENST00000434165 553 ntBASIC4.64□□□□□ -1.67
NXF3Q9H4D5 CEACAMP1-201ENST00000434624 1035 ntBASIC4.64□□□□□ -1.67
NXF3Q9H4D5 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.64□□□□□ -1.67
NXF3Q9H4D5 TMX2P1-201ENST00000436507 708 ntBASIC4.64□□□□□ -1.67
NXF3Q9H4D5 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.64□□□□□ -1.67
NXF3Q9H4D5 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
NXF3Q9H4D5 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.64□□□□□ -1.67
NXF3Q9H4D5 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.64□□□□□ -1.67
NXF3Q9H4D5 AC006116.5-201ENST00000591936 559 ntBASIC4.64□□□□□ -1.67
NXF3Q9H4D5 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms