Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
TRIM4Q9C037 RNU6-761P-201ENST00000384148 107 ntBASIC4.57□□□□□ -1.68
TRIM4Q9C037 MIR3074-201ENST00000384885 81 ntBASIC4.57□□□□□ -1.68
TRIM4Q9C037 RPL32P23-201ENST00000397237 405 ntBASIC4.57□□□□□ -1.68
TRIM4Q9C037 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.57□□□□□ -1.68
TRIM4Q9C037 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.57□□□□□ -1.68
TRIM4Q9C037 GTF2IP5-201ENST00000414608 731 ntBASIC4.57□□□□□ -1.68
TRIM4Q9C037 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM4Q9C037 LINC00993-201ENST00000420453 540 ntBASIC4.57□□□□□ -1.68
TRIM4Q9C037 RPL23AP1-201ENST00000428990 471 ntBASIC4.57□□□□□ -1.68
TRIM4Q9C037 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM4Q9C037 AC092162.1-201ENST00000432828 434 ntBASIC4.57□□□□□ -1.68
TRIM4Q9C037 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM4Q9C037 RPL23AP65-201ENST00000475608 468 ntBASIC4.57□□□□□ -1.68
TRIM4Q9C037 AC012158.1-204ENST00000483430 465 ntBASIC4.57□□□□□ -1.68
TRIM4Q9C037 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM4Q9C037 LDHBP3-201ENST00000514909 822 ntBASIC4.57□□□□□ -1.68
TRIM4Q9C037 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.57□□□□□ -1.68
TRIM4Q9C037 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.57□□□□□ -1.68
TRIM4Q9C037 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.57□□□□□ -1.68
TRIM4Q9C037 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM4Q9C037 AL049839.1-201ENST00000556151 657 ntBASIC4.57□□□□□ -1.68
TRIM4Q9C037 AC093249.4-201ENST00000564755 259 ntBASIC4.57□□□□□ -1.68
TRIM4Q9C037 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.57□□□□□ -1.68
TRIM4Q9C037 AC245389.1-201ENST00000605141 529 ntBASIC4.57□□□□□ -1.68
TRIM4Q9C037 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM4Q9C037 AC004825.2-201ENST00000616634 455 ntBASIC4.57□□□□□ -1.68
TRIM4Q9C037 ZYXP1-201ENST00000617638 118 ntBASIC4.57□□□□□ -1.68
TRIM4Q9C037 MIR6853-201ENST00000619642 74 ntBASIC4.57□□□□□ -1.68
TRIM4Q9C037 AC067852.7-201ENST00000623270 535 ntBASIC4.57□□□□□ -1.68
TRIM4Q9C037 MIR6715B-201ENST00000637172 77 ntBASIC4.57□□□□□ -1.68
TRIM4Q9C037 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM4Q9C037 AC090971.4-201ENST00000560291 1800 ntBASIC4.57□□□□□ -1.68
TRIM4Q9C037 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM4Q9C037 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM4Q9C037 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM4Q9C037 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.57□□□□□ -1.68
TRIM4Q9C037 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
TRIM4Q9C037 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.57□□□□□ -1.68
TRIM4Q9C037 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM4Q9C037 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 DHX40P1-201ENST00000588725 1412 ntBASIC4.56□□□□□ -1.68
TRIM4Q9C037 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM4Q9C037 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM4Q9C037 AC008725.1-201ENST00000605123 2263 ntBASIC4.56□□□□□ -1.68
TRIM4Q9C037 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM4Q9C037 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 OR4K15-201ENST00000305051 1216 ntBASIC4.56□□□□□ -1.68
TRIM4Q9C037 RNA5SP387-201ENST00000364226 106 ntBASIC4.56□□□□□ -1.68
TRIM4Q9C037 SNORA70.4-201ENST00000365509 134 ntBASIC4.56□□□□□ -1.68
TRIM4Q9C037 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 OR2B7P-201ENST00000429302 934 ntBASIC4.56□□□□□ -1.68
TRIM4Q9C037 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 MTND6P5-201ENST00000448266 512 ntBASIC4.56□□□□□ -1.68
TRIM4Q9C037 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 APOOP2-201ENST00000461561 539 ntBASIC4.56□□□□□ -1.68
TRIM4Q9C037 ATP5G1P3-201ENST00000463301 410 ntBASIC4.56□□□□□ -1.68
TRIM4Q9C037 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 Y_RNA.719-201ENST00000517156 106 ntBASIC4.56□□□□□ -1.68
TRIM4Q9C037 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.56□□□□□ -1.68
TRIM4Q9C037 VTA1P2-201ENST00000520205 911 ntBASIC4.56□□□□□ -1.68
TRIM4Q9C037 AC090819.1-201ENST00000523800 1111 ntBASIC4.56□□□□□ -1.68
TRIM4Q9C037 OR5M2P-201ENST00000529003 936 ntBASIC4.56□□□□□ -1.68
TRIM4Q9C037 CYCSP29-201ENST00000533731 318 ntBASIC4.56□□□□□ -1.68
TRIM4Q9C037 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM4Q9C037 FKBP1BP1-201ENST00000553366 325 ntBASIC4.56□□□□□ -1.68
TRIM4Q9C037 AL352979.3-201ENST00000553515 247 ntBASIC4.56□□□□□ -1.68
TRIM4Q9C037 AC087477.6-201ENST00000559595 843 ntBASIC4.56□□□□□ -1.68
TRIM4Q9C037 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 AC098935.2-201ENST00000604222 466 ntBASIC4.56□□□□□ -1.68
TRIM4Q9C037 AL645927.2-201ENST00000618350 349 ntBASIC4.56□□□□□ -1.68
TRIM4Q9C037 AC015804.1-201ENST00000622935 435 ntBASIC4.56□□□□□ -1.68
TRIM4Q9C037 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM4Q9C037 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM4Q9C037 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.56□□□□□ -1.68
TRIM4Q9C037 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM4Q9C037 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
TRIM4Q9C037 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM4Q9C037 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM4Q9C037 HSPD1P14-201ENST00000432666 1618 ntBASIC4.55□□□□□ -1.68
TRIM4Q9C037 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM4Q9C037 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM4Q9C037 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TRIM4Q9C037 ELOCP19-201ENST00000411919 318 ntBASIC4.55□□□□□ -1.68
TRIM4Q9C037 VN1R37P-201ENST00000419096 748 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms