Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHANK3Q9BYB0 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SHANK3Q9BYB0 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SHANK3Q9BYB0 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.4□□□□□ -1.54
SHANK3Q9BYB0 MTND5P1-201ENST00000445440 1375 ntBASIC5.4□□□□□ -1.54
SHANK3Q9BYB0 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHANK3Q9BYB0 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
SHANK3Q9BYB0 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.4□□□□□ -1.55
SHANK3Q9BYB0 AC016588.2-201ENST00000632484 3021 ntBASIC5.4□□□□□ -1.55
SHANK3Q9BYB0 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHANK3Q9BYB0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.4□□□□□ -1.55
SHANK3Q9BYB0 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHANK3Q9BYB0 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SHANK3Q9BYB0 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHANK3Q9BYB0 AL603766.1-201ENST00000407763 664 ntBASIC5.4□□□□□ -1.55
SHANK3Q9BYB0 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.4□□□□□ -1.55
SHANK3Q9BYB0 AL352979.3-201ENST00000553515 247 ntBASIC5.4□□□□□ -1.55
SHANK3Q9BYB0 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.4□□□□□ -1.55
SHANK3Q9BYB0 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.4□□□□□ -1.55
SHANK3Q9BYB0 FP236240.3-201ENST00000623061 327 ntBASIC5.4□□□□□ -1.55
SHANK3Q9BYB0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 ZNF285B-201ENST00000561698 1767 ntBASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 AL049781.1-201ENST00000623195 3585 ntBASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 AC058791.1-201ENST00000608412 3198 ntBASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 AL137843.1-201ENST00000605078 385 ntBASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 AC091905.2-201ENST00000623143 306 ntBASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 ZNF833P-201ENST00000424938 1494 ntBASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHANK3Q9BYB0 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 RNA5SP399-201ENST00000364003 117 ntBASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 AL078604.1-201ENST00000404609 466 ntBASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 MIR1179-201ENST00000408703 91 ntBASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 NPM1P28-201ENST00000492269 840 ntBASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 MIR8069-1-201ENST00000616627 86 ntBASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 MIR8069-2-201ENST00000621412 86 ntBASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.38□□□□□ -1.55
SHANK3Q9BYB0 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.37□□□□□ -1.55
SHANK3Q9BYB0 UBTFL3-201ENST00000418934 1024 ntBASIC5.37□□□□□ -1.55
SHANK3Q9BYB0 AC104306.1-201ENST00000449702 371 ntBASIC5.37□□□□□ -1.55
SHANK3Q9BYB0 PPIAP3-201ENST00000450588 505 ntBASIC5.37□□□□□ -1.55
SHANK3Q9BYB0 UBTFL6-201ENST00000477929 1024 ntBASIC5.37□□□□□ -1.55
SHANK3Q9BYB0 RPS29P2-201ENST00000479278 136 ntBASIC5.37□□□□□ -1.55
SHANK3Q9BYB0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.37□□□□□ -1.55
SHANK3Q9BYB0 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.37□□□□□ -1.55
SHANK3Q9BYB0 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.37□□□□□ -1.55
SHANK3Q9BYB0 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.37□□□□□ -1.55
SHANK3Q9BYB0 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.37□□□□□ -1.55
SHANK3Q9BYB0 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.37□□□□□ -1.55
SHANK3Q9BYB0 SCARNA15.3-201ENST00000626315 122 ntBASIC5.37□□□□□ -1.55
SHANK3Q9BYB0 SCARNA4.1-201ENST00000628597 123 ntBASIC5.37□□□□□ -1.55
SHANK3Q9BYB0 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHANK3Q9BYB0 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SHANK3Q9BYB0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHANK3Q9BYB0 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SHANK3Q9BYB0 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHANK3Q9BYB0 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.37□□□□□ -1.55
SHANK3Q9BYB0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms