Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
AP1S3Q96PC3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.26□□□□□ -1.89
AP1S3Q96PC3 MTCO1P14-201ENST00000441695 1559 ntBASIC3.26□□□□□ -1.89
AP1S3Q96PC3 LINC00622-201ENST00000562811 1570 ntBASIC3.26□□□□□ -1.89
AP1S3Q96PC3 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC3.26□□□□□ -1.89
AP1S3Q96PC3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
AP1S3Q96PC3 OR13C3-201ENST00000374781 1108 ntBASIC3.26□□□□□ -1.89
AP1S3Q96PC3 AL136131.1-201ENST00000406079 803 ntBASIC3.26□□□□□ -1.89
AP1S3Q96PC3 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.26□□□□□ -1.89
AP1S3Q96PC3 RN7SKP167-201ENST00000411047 285 ntBASIC3.26□□□□□ -1.89
AP1S3Q96PC3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.26□□□□□ -1.89
AP1S3Q96PC3 RPS12P10-201ENST00000427031 377 ntBASIC3.26□□□□□ -1.89
AP1S3Q96PC3 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.26□□□□□ -1.89
AP1S3Q96PC3 CEACAMP1-201ENST00000434624 1035 ntBASIC3.26□□□□□ -1.89
AP1S3Q96PC3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.26□□□□□ -1.89
AP1S3Q96PC3 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.26□□□□□ -1.89
AP1S3Q96PC3 AC104109.1-201ENST00000498563 436 ntBASIC3.26□□□□□ -1.89
AP1S3Q96PC3 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
AP1S3Q96PC3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
AP1S3Q96PC3 ATP5LP3-201ENST00000514223 304 ntBASIC3.26□□□□□ -1.89
AP1S3Q96PC3 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
AP1S3Q96PC3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.26□□□□□ -1.89
AP1S3Q96PC3 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.26□□□□□ -1.89
AP1S3Q96PC3 AL110118.1-201ENST00000553543 400 ntBASIC3.26□□□□□ -1.89
AP1S3Q96PC3 EDDM3DP-201ENST00000554692 434 ntBASIC3.26□□□□□ -1.89
AP1S3Q96PC3 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.26□□□□□ -1.89
AP1S3Q96PC3 AC007225.2-201ENST00000562529 256 ntBASIC3.26□□□□□ -1.89
AP1S3Q96PC3 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.26□□□□□ -1.89
AP1S3Q96PC3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.26□□□□□ -1.89
AP1S3Q96PC3 AC011487.3-201ENST00000593607 453 ntBASIC3.26□□□□□ -1.89
AP1S3Q96PC3 AC011453.2-201ENST00000603737 729 ntBASIC3.26□□□□□ -1.89
AP1S3Q96PC3 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.26□□□□□ -1.89
AP1S3Q96PC3 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.26□□□□□ -1.89
AP1S3Q96PC3 AP000864.1-201ENST00000609424 650 ntBASIC3.26□□□□□ -1.89
AP1S3Q96PC3 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC3.26□□□□□ -1.89
AP1S3Q96PC3 AC112694.2-201ENST00000623697 768 ntBASIC3.26□□□□□ -1.89
AP1S3Q96PC3 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
AP1S3Q96PC3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
AP1S3Q96PC3 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
AP1S3Q96PC3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
AP1S3Q96PC3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
AP1S3Q96PC3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
AP1S3Q96PC3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
AP1S3Q96PC3 MFSD8-236ENST00000641509 4050 ntBASIC3.25□□□□□ -1.89
AP1S3Q96PC3 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.25□□□□□ -1.89
AP1S3Q96PC3 AC007342.7-201ENST00000624610 2337 ntBASIC3.25□□□□□ -1.89
AP1S3Q96PC3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
AP1S3Q96PC3 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.25□□□□□ -1.89
AP1S3Q96PC3 RNU4-4P-201ENST00000364588 130 ntBASIC3.25□□□□□ -1.89
AP1S3Q96PC3 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
AP1S3Q96PC3 MTND4LP21-201ENST00000415303 295 ntBASIC3.25□□□□□ -1.89
AP1S3Q96PC3 AC093162.1-201ENST00000419682 124 ntBASIC3.25□□□□□ -1.89
AP1S3Q96PC3 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.25□□□□□ -1.89
AP1S3Q96PC3 RAD23BP1-201ENST00000421404 1227 ntBASIC3.25□□□□□ -1.89
AP1S3Q96PC3 AC007559.1-201ENST00000428736 355 ntBASIC3.25□□□□□ -1.89
AP1S3Q96PC3 OR2B7P-201ENST00000429302 934 ntBASIC3.25□□□□□ -1.89
AP1S3Q96PC3 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC3.25□□□□□ -1.89
AP1S3Q96PC3 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.25□□□□□ -1.89
AP1S3Q96PC3 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.25□□□□□ -1.89
AP1S3Q96PC3 AC073850.1-201ENST00000449243 255 ntBASIC3.25□□□□□ -1.89
AP1S3Q96PC3 AC108463.1-201ENST00000450258 347 ntBASIC3.25□□□□□ -1.89
AP1S3Q96PC3 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC3.25□□□□□ -1.89
AP1S3Q96PC3 AL356390.1-201ENST00000455684 397 ntBASIC3.25□□□□□ -1.89
AP1S3Q96PC3 snoU13.20-201ENST00000459180 104 ntBASIC3.25□□□□□ -1.89
AP1S3Q96PC3 AC069499.1-201ENST00000489433 509 ntBASIC3.25□□□□□ -1.89
AP1S3Q96PC3 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC3.25□□□□□ -1.89
AP1S3Q96PC3 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.25□□□□□ -1.89
AP1S3Q96PC3 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.25□□□□□ -1.89
AP1S3Q96PC3 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.25□□□□□ -1.89
AP1S3Q96PC3 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
AP1S3Q96PC3 MIR486-1-201ENST00000612171 68 ntBASIC3.25□□□□□ -1.89
AP1S3Q96PC3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
AP1S3Q96PC3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
AP1S3Q96PC3 AC010928.1-201ENST00000592477 1447 ntBASIC3.25□□□□□ -1.89
AP1S3Q96PC3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.25□□□□□ -1.89
AP1S3Q96PC3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
AP1S3Q96PC3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
AP1S3Q96PC3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
AP1S3Q96PC3 RPS4XP5-202ENST00000449995 1334 ntBASIC3.24□□□□□ -1.89
AP1S3Q96PC3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
AP1S3Q96PC3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.24□□□□□ -1.89
AP1S3Q96PC3 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.24□□□□□ -1.89
AP1S3Q96PC3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
AP1S3Q96PC3 AC007685.1-201ENST00000329806 452 ntBASIC3.24□□□□□ -1.89
AP1S3Q96PC3 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
AP1S3Q96PC3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.24□□□□□ -1.89
AP1S3Q96PC3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
AP1S3Q96PC3 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.24□□□□□ -1.89
AP1S3Q96PC3 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.24□□□□□ -1.89
AP1S3Q96PC3 RNU1-106P-201ENST00000384382 164 ntBASIC3.24□□□□□ -1.89
AP1S3Q96PC3 MT-RNR1-201ENST00000389680 954 ntBASIC3.24□□□□□ -1.89
AP1S3Q96PC3 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.24□□□□□ -1.89
AP1S3Q96PC3 BX510359.2-201ENST00000417920 305 ntBASIC3.24□□□□□ -1.89
AP1S3Q96PC3 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.24□□□□□ -1.89
AP1S3Q96PC3 NRBF2P3-201ENST00000432731 865 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms