Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC004815.1-201ENST00000484185 331 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 AC072052.1-201ENST00000496556 306 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 AC005351.1-201ENST00000511152 786 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 AC119751.5-201ENST00000514077 770 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 RNU6-347P-201ENST00000516658 105 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 AC040958.1-201ENST00000561102 201 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 MIR1269B-201ENST00000580405 75 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 AC025588.2-201ENST00000604851 466 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 AC107952.2-201ENST00000606048 486 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 AC009237.15-201ENST00000610252 501 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 VN1R74P-201ENST00000613259 503 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 MTND4P10-201ENST00000446199 1363 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 RNU6-98P-201ENST00000384173 107 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 RNY3P9-201ENST00000384727 106 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 MTND4P13-201ENST00000402078 1023 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AC211486.3-201ENST00000412694 621 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 RPL6P29-201ENST00000414863 865 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AC099336.2-201ENST00000422457 254 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AL355433.1-201ENST00000422804 300 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 COX6CP13-201ENST00000428703 226 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 ELOCP10-201ENST00000440624 327 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 CYCSP24-201ENST00000445119 316 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AC004980.3-201ENST00000447046 365 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AL389915.2-201ENST00000454576 441 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AC099560.2-201ENST00000457554 255 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AC079841.1-201ENST00000481228 950 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AC091860.1-201ENST00000505723 432 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AC008565.1-201ENST00000509046 885 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 RNA5SP228-201ENST00000516232 133 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AC138832.1-201ENST00000522871 556 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 MRPS36P5-201ENST00000551909 298 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 MTND3P13-201ENST00000574391 343 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AC008536.1-201ENST00000602872 669 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 ELOCP34-201ENST00000604436 327 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AC009948.4-201ENST00000604692 675 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AL138478.1-201ENST00000612252 832 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 AC099494.2-201ENST00000623371 978 ntBASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.75□□□□□ -1.49
CDK5RAP3Q96JB5 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 PANDAR-201ENST00000629595 1506 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms