Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AC005294.1-201ENST00000355509 281 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AL590084.2-201ENST00000401481 382 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AC004074.1-201ENST00000421810 1063 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AL009174.1-201ENST00000426577 416 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AL035407.1-201ENST00000429211 571 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 RPS24P8-201ENST00000431490 402 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 CYCSP6-201ENST00000434498 302 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 RPL23AP76-201ENST00000441860 458 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 RPS11P7-201ENST00000442125 465 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 MTCO2P7-201ENST00000446518 666 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 MTND4LP3-201ENST00000468320 276 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 RAP1BP2-201ENST00000478270 544 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 VPS26AP1-201ENST00000483197 979 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 RN7SL214P-201ENST00000487317 265 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 RN7SL629P-201ENST00000489622 285 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AL035404.1-201ENST00000497982 568 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 DYNLL1P6-201ENST00000503440 264 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 WBP1LP4-201ENST00000505043 344 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AC109445.1-201ENST00000512356 383 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AC008837.2-201ENST00000513076 418 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 RNU6-941P-201ENST00000516346 108 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 HMGB1P23-201ENST00000518743 568 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AC092709.1-201ENST00000521355 1045 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 MTCO1P49-201ENST00000523429 802 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 NPM1P47-201ENST00000560843 856 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 RPL10P14-201ENST00000565265 298 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 FKBP1AP1-201ENST00000594588 318 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AC006539.2-201ENST00000601729 572 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AC068790.2-201ENST00000602601 557 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AC009220.3-201ENST00000604318 586 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 OR2AS2P-201ENST00000606902 342 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AL451074.6-201ENST00000608512 729 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AC055764.2-201ENST00000610089 670 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AC098679.4-201ENST00000624241 654 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AF001550.2-201ENST00000636643 217 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AP000776.1-201ENST00000530032 1663 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 RN7SKP153-201ENST00000365026 316 ntBASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 RNU6-317P-201ENST00000384031 107 ntBASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 MIR16-1-201ENST00000385271 89 ntBASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 RNU6-757P-201ENST00000410334 100 ntBASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 AL445213.1-201ENST00000412589 747 ntBASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 QRSL1P2-201ENST00000418582 964 ntBASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 AC093655.2-201ENST00000425735 631 ntBASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 FTLP19-201ENST00000433300 394 ntBASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 RPL19P16-201ENST00000433839 588 ntBASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 AC073648.4-201ENST00000442655 781 ntBASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 NOP56P2-201ENST00000447491 769 ntBASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 AC009961.3-201ENST00000449832 765 ntBASIC4.95□□□□□ -1.62
CTHRC1Q96CG8 GAPDHP14-201ENST00000450472 937 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms