Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 BX649567.1-201ENST00000642071 1134 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 AC004817.4-201ENST00000602396 3625 ntBASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 RNU1-146P-201ENST00000364015 165 ntBASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 RNU6-353P-201ENST00000364266 108 ntBASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 SNORD116-12-201ENST00000384468 92 ntBASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 MTND4P31-201ENST00000425607 1343 ntBASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 RBMY2QP-201ENST00000429799 1147 ntBASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 RPS24P8-201ENST00000431490 402 ntBASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 NSRP1P1-201ENST00000444067 1693 ntBASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 CASP3P1-201ENST00000446037 609 ntBASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 AC005002.1-201ENST00000447458 540 ntBASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 SNRPCP2-201ENST00000504370 475 ntBASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 TAS2R6P-201ENST00000605022 826 ntBASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 AC037198.3-201ENST00000616754 526 ntBASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 BX005214.3-202ENST00000619809 325 ntBASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHMP4CQ96CF2 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 RNF6P1-201ENST00000444889 1784 ntBASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 AC111188.2-201ENST00000529697 1387 ntBASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 AL355578.1-201ENST00000607405 1328 ntBASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 RNA5SP90-201ENST00000364801 99 ntBASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 AL390316.1-201ENST00000406279 553 ntBASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 MTCO3P21-201ENST00000430791 643 ntBASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 PTGES3P5-201ENST00000455109 434 ntBASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 HMGB1P4-201ENST00000455362 567 ntBASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 AC134050.1-201ENST00000495088 933 ntBASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 AC091860.1-201ENST00000505723 432 ntBASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 PRELID3BP5-201ENST00000508612 460 ntBASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 GTF2F2P1-201ENST00000511083 675 ntBASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 AC004980.4-201ENST00000513375 203 ntBASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 RN7SKP147-201ENST00000517154 244 ntBASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 AC009163.6-201ENST00000612367 342 ntBASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 AC006386.1-201ENST00000619436 415 ntBASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 AC109454.4-201ENST00000623411 649 ntBASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 BBX-203ENST00000402543 3980 ntTSL 5 BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 AC073136.1-201ENST00000449426 2884 ntBASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC6.11□□□□□ -1.43
CHMP4CQ96CF2 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHMP4CQ96CF2 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms