Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.3□□□□□ -1.72
RFT1Q96AA3 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RFT1Q96AA3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RFT1Q96AA3 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RFT1Q96AA3 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.29□□□□□ -1.72
RFT1Q96AA3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RFT1Q96AA3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
RFT1Q96AA3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFT1Q96AA3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFT1Q96AA3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RFT1Q96AA3 RNU6-543P-201ENST00000362576 108 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 RNU1-20P-201ENST00000363314 162 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 NUDT19P3-201ENST00000404698 555 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 ATF1P1-201ENST00000406040 927 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 HMGB3P18-201ENST00000406327 590 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 DUTP5-201ENST00000406790 469 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 U3.35-201ENST00000408405 208 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RFT1Q96AA3 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RFT1Q96AA3 AC008173.1-201ENST00000418901 264 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 OR2X1P-201ENST00000421144 687 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 AC013410.2-201ENST00000422627 201 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 PDSS1P1-201ENST00000422953 1114 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.29□□□□□ -1.72
RFT1Q96AA3 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 AL450023.3-201ENST00000440592 271 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
RFT1Q96AA3 RPL6P5-201ENST00000445678 828 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 TCEA1P1-201ENST00000449716 880 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 NDUFS5P3-201ENST00000450668 321 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 AC008379.1-201ENST00000463655 464 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 RN7SL799P-201ENST00000475891 298 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 RN7SL41P-201ENST00000476144 297 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 AL136038.1-201ENST00000497246 351 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 OR5H3P-201ENST00000502817 919 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 RNA5SP497-201ENST00000516081 97 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.29□□□□□ -1.72
RFT1Q96AA3 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.29□□□□□ -1.72
RFT1Q96AA3 AL049779.2-201ENST00000553847 315 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.29□□□□□ -1.72
RFT1Q96AA3 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.29□□□□□ -1.72
RFT1Q96AA3 BNIP3P19-201ENST00000605397 577 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 AC091979.2-201ENST00000607514 214 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.29□□□□□ -1.72
RFT1Q96AA3 VN1R9P-201ENST00000614184 867 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 STMN1P1-201ENST00000617809 440 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 AC253576.2-201ENST00000618815 580 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 MIR6837-201ENST00000620884 64 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 AC068880.4-201ENST00000623082 495 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 AC067852.7-201ENST00000623270 535 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 AC080188.3-201ENST00000624842 748 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 U6.107-201ENST00000637108 79 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 AL356489.2-201ENST00000566968 3528 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 HSPA8P19-201ENST00000505359 1517 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 PANDAR-201ENST00000629595 1506 ntBASIC4.29□□□□□ -1.72
RFT1Q96AA3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFT1Q96AA3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFT1Q96AA3 MTND4P26-201ENST00000415971 1359 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RFT1Q96AA3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFT1Q96AA3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
RFT1Q96AA3 SNORA63.3-201ENST00000362682 132 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 RNU6-481P-201ENST00000384194 107 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RFT1Q96AA3 OR3A2-201ENST00000408891 1076 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 RNU2-6P-201ENST00000411404 190 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.28□□□□□ -1.72
RFT1Q96AA3 AL445183.3-201ENST00000414168 502 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.28□□□□□ -1.72
RFT1Q96AA3 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RFT1Q96AA3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.28□□□□□ -1.72
RFT1Q96AA3 DYNLL1P7-201ENST00000429273 258 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.28□□□□□ -1.72
RFT1Q96AA3 AC079807.1-201ENST00000429993 481 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.28□□□□□ -1.72
RFT1Q96AA3 AL158053.1-201ENST00000441503 453 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.28□□□□□ -1.72
RFT1Q96AA3 AC144530.1-201ENST00000452862 555 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.28□□□□□ -1.72
RFT1Q96AA3 RPS17P2-201ENST00000461663 408 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 RN7SL517P-201ENST00000462240 305 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 RPL7P39-201ENST00000481157 744 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 BX510359.5-201ENST00000515651 304 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.28□□□□□ -1.72
RFT1Q96AA3 IGKV2-36-201ENST00000519999 223 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.28□□□□□ -1.72
RFT1Q96AA3 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.28□□□□□ -1.72
RFT1Q96AA3 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.28□□□□□ -1.72
RFT1Q96AA3 AC087477.6-201ENST00000559595 843 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.28□□□□□ -1.72
RFT1Q96AA3 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.28□□□□□ -1.72
RFT1Q96AA3 AC110743.1-201ENST00000584870 478 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.28□□□□□ -1.72
RFT1Q96AA3 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RFT1Q96AA3 AC115085.1-201ENST00000588924 229 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 AL139286.1-201ENST00000604465 483 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 AL355816.1-201ENST00000607951 118 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 AC021851.1-201ENST00000608537 1082 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 AL356121.2-201ENST00000624715 780 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms